Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0244 ATGATACAGGAGCCTAGTTCTAGTGGCACTGATATAAATCAGCAGACTTCCTCGAATCACATGCAAAATCCAGTTGATGCTCGGTTGTCCGATTTTCTTGGATCCTCTGGTGAGACTGCATGTTTACGCACCAGTGGTCCTAATGTTCAGAACTTTGATGGATGGAATGCTGGTGAACCTGGTTCTAATGTGAGTCTTCACAGTCAAGTCAATAATGATGTGCTAAAAGCAGAACATGGTTGGTCTTCTTCATGTGGTGCTTCTACTGAGGGTGTTCTCAGACCAGAAGAACGGCAATTTGATCCAAATAATGTAACTTTCCCTGGTAGCTCGAATACCAGCTTACGTGGAAATCAATCCAGAGTTCAGCCTTTCTTCTTGCAAGGTTCCAGCTCCAATCATAGAACCCAGAATGCGGCTTTAAATATGGGTTCCATTGACAGCCCTGCTAATCATGGGAAAGGAACAGAACCTTGCAGCAGTGATAGTATTCACAATACATATGGTTTCAATAGTAAGCTTACATCATTTGATAGTGCTTCACGTGATCATATAGGAACTTCATCTGGAAGCTCTGGTTACATTGTTGGGGGAGATAATGATAATTCAAGCTCCTTAGTTAATTGGGGTTCTTCCTGCAAGAGAAAGGCTCTTGAAAGTACTTCTGGGCAGCTGTGTACTGGAGGAAGTTCAAGCTCTTTTCTAGAAGCTGAAAGCAGTTGCTGGCCTACTGGGACTTCCAATTCTAATATTGCTTCCAGCAGTTTAAATGTGTCTAGACCTTCTGAGGATATTTCTATTACTAATCCTCCAGTAGAGCAGAACCCAAGAAATGAGATGAGGCAAAGAGCATCTGATGCATTCCCTTTGGTAGGAGTTATGGGAAATGTGAACAGGCCTCTGAGAAACTTTGATAGGAGGGTGAATTATCCACAGCGACGGGAATCCAGGCATCCTAATCATTCTTCATCCCGCCAAATAGCCACTTCTCACCCATTTAATGATTCGCTAGAATTAAGGTTAACAGCCGGAGTTACAGCAACCAGTTCTAGTGCTCCTCAGTGTCAGTCACATGTCACACACATCCCTGGTTTGCCATGGAACACACGTCTCTTTCCTTGGAGTGGAGCTTCTAGTTCAAGAGGAGCCAGTTCATCTACTTATAACTCTGCAGATAGAGAACTTCGGGAAGAATTGAACCTAAGAATTTTTCCAAGAGACAATACAGAGCACCCCATCCTTGCTCCTTCATCGCCTGGACTTGACCCTACAAGTTGGCATATGTCATCTGGCAATGGGAACAATTCTGGTAGTGTACCTCCTCCACCTTGTATTGGATCCAGTTCAAGTGTCAATGCATTACCTAATCCGAGCTGGATTGTTCCCCATGAAGTTCCAACGCAGAGCCAGCAAAGATTATCAGAGTTCAGTCCCTGGTCCTTTTTTCCGTCAATGAACTCAGTATCTGGTGTTCATAATGTTCATTCTGCCTCATCTTCTACTTCTTCTGGTCCTCCTTCCTTTACTCCAGACACGAGCAACCACCATTCATATCCAAGATTAGCGTCATTGATGGAGAGAAGAGGCGATGAAGTTCTTAGCGCGCCCCAATCATTGCGGGCTTTAGCTGTTGACATTGAGGGGAGACGCCGATTGATATCTGAGATTCGCCAAGTCTTAAGTGCCATGCGTAGGGGTGAGAACCTACGAGCTGAGGATTATATGCTCTTTGACCCTTTCATATACCATGGTATGGCTGAACTGCATGATAGGCACAGGGACATGCGCCTTGATGTTGATAACATGTCTTACGAGGAATTGCTGGCATTGGAGGAGCGCATAGGAGATGTGAGCACTGGATTAAACGAGGATACCATTATGAGGTTGATGAAACATCGGATCTACGTGTCTGTCATGACCGAGTCTTCTACATATCTGGAACCTTGTTGTGTTTGTCAGAGTTCAGACCTCAGCTTTGTTTCATTTGATGAACTTGCTGCTGCTTACGAAGGACTGGATTTTCCCATGTGTAGGATGGGAAAGGAAAGGAAAATTAAAAAGAAGGATGATACCTTGGCTGCCTCTACTGGACATGCTTGTGATCGACCTGTCTGCTTTAATTCAAGCAATGCCTGTCTTGAGTAG 2145 0.4443 MIQEPSSSGTDINQQTSSNHMQNPVDARLSDFLGSSGETACLRTSGPNVQNFDGWNAGEPGSNVSLHSQVNNDVLKAEHGWSSSCGASTEGVLRPEERQFDPNNVTFPGSSNTSLRGNQSRVQPFFLQGSSSNHRTQNAALNMGSIDSPANHGKGTEPCSSDSIHNTYGFNSKLTSFDSASRDHIGTSSGSSGYIVGGDNDNSSSLVNWGSSCKRKALESTSGQLCTGGSSSSFLEAESSCWPTGTSNSNIASSSLNVSRPSEDISITNPPVEQNPRNEMRQRASDAFPLVGVMGNVNRPLRNFDRRVNYPQRRESRHPNHSSSRQIATSHPFNDSLELRLTAGVTATSSSAPQCQSHVTHIPGLPWNTRLFPWSGASSSRGASSSTYNSADRELREELNLRIFPRDNTEHPILAPSSPGLDPTSWHMSSGNGNNSGSVPPPPCIGSSSSVNALPNPSWIVPHEVPTQSQQRLSEFSPWSFFPSMNSVSGVHNVHSASSSTSSGPPSFTPDTSNHHSYPRLASLMERRGDEVLSAPQSLRALAVDIEGRRRLISEIRQVLSAMRRGENLRAEDYMLFDPFIYHGMAELHDRHRDMRLDVDNMSYEELLALEERIGDVSTGLNEDTIMRLMKHRIYVSVMTESSTYLEPCCVCQSSDLSFVSFDELAAAYEGLDFPMCRMGKERKIKKKDDTLAASTGHACDRPVCFNSSNACLE 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0244 714 Coils Coil 713 714 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 422 448 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 306 321 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 1 32 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 495 517 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 303 333 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 1 25 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 407 448 - -
Lele48g0244 714 MobiDBLite consensus disorder prediction 254 278 - -
Lele48g0244 714 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 209 655 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0244 Lele-ChrLele48 2406739 2410952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0244 2 674 C3H Transcription Factor Family AT2G15530 34.250 1.83e-80 269