Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0243 ATGGAGAACCCTTCAAACACAAGAGGGAAGGAGAAGCTTGTTGCTAATACCAGTGATGAGATGGATACTGCTGAGAGGGAGAGGCGTAAGAAAATCAAATCATTGTTTGGTAACCTTCATGCTATGCTCCCTCATGTCCCCAAACAGGCAGACAAAGTGACAGTGGTGGATGAAACATTGAACTACATAAGAGTGTTGGAGCAAACTTTGAAAGACCTTCAAAAGAGGAAGCAGCAACGACTTCATCAATCGTCTGTCGTCTCTAATGTTGGAACTTCAAGAGAGGCCTTCATAGCTGAACATGTAGCTTCGTCCTCATCATTCTCTCCAATTGCTTCAAGTCCACATGAATATGGCCCAGCAGGGTTCCGAACTTGGACTTCTCCCAATGTTGTAATCAACATTTGTGGACACGAAGCTCATTTCAGTGTTTGTTGTACCAACGATTGCTCCGGCGGCCTCTTCACCGACATCTGTTGTGTTCTCGAGAAGTATAAGATTGAGGTTCTGTCTGCTCATATTTCATGTGACAATAACGATCGCAGGTTCTATATGTTTCATGCACAAGTGAACGGAGATTCTGATCAGCTTCCAGGGCCGTTAGCGGCTGAGGTAATATTCAAGCAAGCTGGTGAAGAAATTATTCTGTGTCTCTGA 657 0.4429 MENPSNTRGKEKLVANTSDEMDTAERERRKKIKSLFGNLHAMLPHVPKQADKVTVVDETLNYIRVLEQTLKDLQKRKQQRLHQSSVVSNVGTSREAFIAEHVASSSSFSPIASSPHEYGPAGFRTWTSPNVVINICGHEAHFSVCCTNDCSGGLFTDICCVLEKYKIEVLSAHISCDNNDRRFYMFHAQVNGDSDQLPGPLAAEVIFKQAGEEIILCL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0243 218 CDD bHLH_AtbHLH_like 24 74 IPR045239 -
Lele48g0243 218 MobiDBLite consensus disorder prediction 1 24 - -
Lele48g0243 218 Gene3D - 20 89 IPR036638 GO:0046983
Lele48g0243 218 SMART finulus 22 72 IPR011598 GO:0046983
Lele48g0243 218 Pfam Helix-loop-helix DNA-binding domain 24 66 IPR011598 GO:0046983
Lele48g0243 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 16 66 IPR011598 GO:0046983
Lele48g0243 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 84 IPR036638 GO:0046983
Lele48g0243 218 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 24 217 IPR044278 GO:0003700|GO:0006355|GO:0009960
Lele48g0243 218 Coils Coil 56 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0243 Lele-ChrLele48 2402080 2403470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0243 25 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 36.842 3.92e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele48g0243 HLH 1.5e-06 No_clan