Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0240 ATGAGTCACAAAAACTCCCTCACTCTTTCACGCGCTCCCACAAGCTCTCGTGTGTCACTCGCAGACTCTGATATCGCTGCCTTCTGGTCTCCCTCAACCCTGGCATTTGCAGTTGCAGAGTTGCAGCACCGTCTTGTGTTTCTCTTTCAAAACTCAACAATGCTTTGTGGGATTGCGTTTTCCTTGTTTGGGCTTTTGGCCATCTTGGGTGTGCAGCTTCCTACAATAATGGCTGATTGCCCTGTGGATTTAAATGCTTCAAACTTTACAATGGCATCCTCTGTCTGCTCAGACCAAGGGGACAGAAATAGCTGTTGTCGCTATCTTAATGCTAATATTGCGGTTTCTGTTGCTCGGTATGCGAATGGAACGGCCAACCTTGGAGTTCCTCCAGGTGCTTCTGACTTCTGCCTCCAGACCATAACTGAGACATTGCAACTTTATGGAGTTCCACCAAATGCAGCTGTTTTCTGTGGTTTTGGGACGAAAGTCCTGGTTAATTATGAGTGTAAAGGTCGAACTACTGTCACGCAGATGCTGCAATCTCCCAGATTTGGTGAGGTCACTGATAATTGCAAAGTGCCTCTTGTAAAGGAAAGTGATTGCAGGAAATGTTTGAATGCTGCCATTGGTTACCTACATAATATAGTAGGTGTACGAGATAATATCACATTAAGTACATGCCGTGATGCCACTTTTACTGCATTGGCAAGCCAAGTTGATGATGTGTCTACCATTGAAATCGCGAGCTGTTTCTTCGGGGTTCAAGGACTTCTTGGGCCTACCGGTACGAATGTTTCAGAGCCATCCACTTCACAAACTCCTGAGGCTTCTCCGAGTCCTCCGGTTGCTGATAGCCCGAGTCCATTGCTGTTAGGTGTACCACTTAAAAGGAATCACCATAGATACCACTTGACATTAATCGCAGATCCTTCGTCTACATTCCGAAAATTCAACTACAGCGAGATAAAGAAGGCGACAGATAATTTTAGCACTATGATTGGGCAAGGAGGATTTGGAACTGTGTATAAATCTCATTTTAGTGATGGTTTAGTGACAGCAGTAAAGCGTATGGATAAAGCATCAGAGCAAAAGGGGGACGAGTTCTGTAGAGAAATAGAGCTCGTCGCTCGGCTTCATCACCGCCATCTAGTCGCATTAAGAGGATTTTGCATTAAAAAACATGAGAGGTACCTGTTTGTGTTTGCCTGCATGTTGTTCCTTTTGATCATCTGTACCTGTGAACCAAACCCCTTCTGCTTCTCTCATGACAGGTTTCTGATATACGAGTACATGGAAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGGAAAACTCCTCTAAGTTGGCGAACTAGAATCCAAATTGCCATTGACGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCTCTCTACCACAGAGACATTAAGTCAAGCAACATCTTACTGGATGAGAAATTTGTCGCAAAGGTAGCTTATTTTGGACTGGCACACGCTTCAAAAGATGGTTCTATACGCTTTGAACCAGTAAATACCGATATCCGGGGAACTCTAGGTTACATGGATCCGGAATATATTGTTACTCGAGAACTCACCGAGAAAAGCGATATTTACAGTTTCGGTGTGCTATTACTAGAGATTGTAACTGGAAGACGAGCGATTCAAGATAACAAGAATCTAGTAGAATGGGCACAACCATTCATAGAATCTGAATCAAGATTGATGGAATTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAAACAGTTGTCTCTATTGTAGGATGGTGCACACAGAGAGAAGGCAGGACAAGGCCTTCAATAAAACATGTCCTTAGACATCTATATGAGACTTCAGAACCAATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAAGAATATAGAGAAAATCAGCAATCTGGAAGAAGAAGCAAGGGAAAATTACACAGAAATGAACCAAATTATCACAATGGGGATGGAATATATAATCTAGCTTCTTCTTCAAGCACTTCCAGGCTAACATATAGGAAGCACTGCTACATCGAAATGGAGCGTAACCCTGTCGCTCGCTCGAATGAAACACCAATCAACTCTTCAAATTGCTCTTCGTCTCTGGTTTTGTTGTAG 2157 0.4316 MSHKNSLTLSRAPTSSRVSLADSDIAAFWSPSTLAFAVAELQHRLVFLFQNSTMLCGIAFSLFGLLAILGVQLPTIMADCPVDLNASNFTMASSVCSDQGDRNSCCRYLNANIAVSVARYANGTANLGVPPGASDFCLQTITETLQLYGVPPNAAVFCGFGTKVLVNYECKGRTTVTQMLQSPRFGEVTDNCKVPLVKESDCRKCLNAAIGYLHNIVGVRDNITLSTCRDATFTALASQVDDVSTIEIASCFFGVQGLLGPTGTNVSEPSTSQTPEASPSPPVADSPSPLLLGVPLKRNHHRYHLTLIADPSSTFRKFNYSEIKKATDNFSTMIGQGGFGTVYKSHFSDGLVTAVKRMDKASEQKGDEFCREIELVARLHHRHLVALRGFCIKKHERYLFVFACMLFLLIICTCEPNPFCFSHDRFLIYEYMENGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLYHRDIKSSNILLDEKFVAKVAYFGLAHASKDGSIRFEPVNTDIRGTLGYMDPEYIVTRELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPFIESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRTRPSIKHVLRHLYETSEPMHSGFLQAVEDEEYRENQQSGRRSKGKLHRNEPNYHNGDGIYNLASSSSTSRLTYRKHCYIEMERNPVARSNETPINSSNCSSSLVLL 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0240 718 Pfam Protein kinase domain 332 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0240 718 CDD STKc_IRAK 334 624 - -
Lele48g0240 718 MobiDBLite consensus disorder prediction 643 664 - -
Lele48g0240 718 FunFam Putative receptor-like protein kinase 432 632 - -
Lele48g0240 718 SMART serkin_6 328 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0240 718 MobiDBLite consensus disorder prediction 643 673 - -
Lele48g0240 718 ProSiteProfiles Protein kinase domain profile. 328 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0240 718 Gene3D Phosphorylase Kinase; domain 1 306 402 - -
Lele48g0240 718 Gene3D Transferase(Phosphotransferase) domain 1 432 650 - -
Lele48g0240 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Lele48g0240 718 MobiDBLite consensus disorder prediction 263 291 - -
Lele48g0240 718 Pfam SPARK 78 216 IPR043891 -
Lele48g0240 718 SUPERFAMILY Protein kinase-like (PK-like) 308 627 IPR011009 -
Lele48g0240 718 FunFam Protein kinase superfamily protein 298 402 - -
Lele48g0240 718 PANTHER OS01G0750732 PROTEIN 247 647 - -
Lele48g0240 718 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Lele48g0240 718 MobiDBLite consensus disorder prediction 263 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0240 Lele-ChrLele48 2367641 2372214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0240 78 669 Receptor kinase-like Gene Family AT3G19300 51.783 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lele48g0240 Pkinase 2.7e-43 CL0016