Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0230 ATGTCTTCATCAGAGAGATTGAAGCTCACCGGAACTCCTATGACCTCCATCTCCACTCAGCTACCGCCTAACTTCTTCTACAACGACCACGAACACTCCGTCATCGTTGAGGCACTAACCAATGTGGTCGTCGGTTCCACCCGCAGCACTATCGCGGCCACCACCTCCAGTGATCTCATCCAAGAAATTCGATTTCCTCCCACCTTTGAGTACTCCGACTCAGTATCTTCCGCCACCTCGGCCCCAATCGGAATTGTTTCGGCCATGAGCGTCGAGACTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGTTGCAAATATTTTCCAGAGGAGAAAAAGAAAACTGGGGGGAAAAGGAAGGCGGCGGCGACTTCGTCGAAGAAGAAGAAGTACAGAGGAGTGCGACAGAGGCCGTGGGGAAAATGGGCTGCCGAGATCCGAGACCCGAGAAGGGCTACCCGGGTTTGGTTGGGGACGTTCAATACCGCAGAGGAAGCCGCACGTGCATACGATAACGCGGCTATTGAATTTCGCGGGCCGCGAGCGAAGCTCAATTTCCCGTTTACGGATAACTCGCTGAGTGATTCGCATTCCCAAACAGAGCAAGAGCAAATGGAAGTTCAACGCTCAGAATCTGTATTGGAGCAAGCAGAGGAGGGAAATATAAACTCAAATCCAGGGAATTACTATGACGAGGTTTGGACGATGGGAATTGGGAATAGTAAGGAAAATGAATTCTTGGATGGACCTGGAGATCCAGAATTTCAGCAATGGATGACGATGATGATGGATTTTGGAGGAGATTCCTCGGACTCTGCTACTACCCATAGCCAGAGTCCTCATAGTTGGTGA 852 0.5059 MSSSERLKLTGTPMTSISTQLPPNFFYNDHEHSVIVEALTNVVVGSTRSTIAATTSSDLIQEIRFPPTFEYSDSVSSATSAPIGIVSAMSVETCGECKIEGCLGCKYFPEEKKKTGGKRKAAATSSKKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPFTDNSLSDSHSQTEQEQMEVQRSESVLEQAEEGNINSNPGNYYDEVWTMGIGNSKENEFLDGPGDPEFQQWMTMMMDFGGDSSDSATTHSQSPHSW 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0230 283 PANTHER DNA-BINDING DOMAIN 94 216 IPR044808 GO:0003700|GO:0009873
Lele48g0230 283 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Lele48g0230 283 Gene3D AP2/ERF domain 129 188 IPR036955 GO:0003700|GO:0006355
Lele48g0230 283 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Lele48g0230 283 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Lele48g0230 283 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Lele48g0230 283 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Lele48g0230 283 SUPERFAMILY DNA-binding domain 130 188 IPR016177 GO:0003677
Lele48g0230 283 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Lele48g0230 283 CDD AP2 129 187 IPR001471 GO:0003700|GO:0006355
Lele48g0230 283 MobiDBLite consensus disorder prediction 264 283 - -
Lele48g0230 283 MobiDBLite consensus disorder prediction 267 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0230 Lele-ChrLele48 2290243 2291094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0230 6 196 AP2-EREBP Transcription Factor Family AT4G34410 43.439 1.00e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele48g0230 AP2 5.6e-16 CL0081