Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0221 ATGGACGACTATTTGAGCAGCGATGAAGATTATCATTACTCCGATCAGGGCTCCGTCGAAGGCTTCGAAAACGACGAGACCGATATTCAGTTGGTCACTCCCAAGGGCCCCACAACTCTGGTGATTACAAGGGAATCACTTCTAGCTGCACAGAAAGAAGATTTGCGCCGAGTAATGGAAATGCTATCACTAAGAGAGCACCATGCACGTACTCTACTTATATATCATCGTTGGGATGTGGAGAAGTTGTTTGCAGTGTATGTAGACAAGGGAAAAGCTGCCTTGTTTGCTGAAGCTGGTGTTAGTGTGGATGAACAGTGTGATCCTGACCCATCAGATCCTTCTACTGTCACATGCGAAATCTGCATAGAGGACGTTCCCAGTCATGAAGCGACAAGAATGGACTGCGGGCACTGTTTTTGCAACAGCTGTTGGACAGCACACTTTATTGTCAAGATAAATGAGGGTCAAAGTAGACGTATAAGGTGCATGGCTCACAAATGTAACGCTATTTGTGATGAAGCTGTTGTGAGAAATCTAGTCAGTAAAGAGAACCCTAATATGGCTGAGAAATTTGATCGTTTTCTTCTTGAATCCTACATTGAAGACAATAAAAGAGTCAAATGGTGTCCCAGCATCCCTCATTGTGGGAATGCAATACGTGTTGAGGATGATGAATTATGTGAGGTAGAATGTTCATGTGGTCTACAGTTCTGTTTTAGTTGCTTGTCAGAGACGCATTCCCCATGTTCTTGTTTGATGTGGGAGCTCTGGGCTAAGAAGTGTCGAGACGAATCAGAAACTGTTAATTGGATTGCAGTCCATACAAAACCTTGTCCAAAATGCCACAAACCAGTGGAGAAGAATGGCGGTTGCAACTTGGTTAGCTGTATTTGTGGTCAAGCATTTTGTTGGCTTTGTGGTGGAGCTACTGGGCGAGAACATACTTGGTCAAGTATAGCGGGTCATAGTTGTGGTCGCTACAAACAGCTAGAGAAAACAGCTGAGCGGGCAAAGCGAGATCTATATCGATACATGCATTATCATAATCGCTATAAAGCTCACACGGACTCCTTTAAACTTGAAAGTAAATTGAAAGAGACTATACAAGTAAAGGTTGCTGTTTCAGAGGAGAGGGATTCTACACTCAGGGATTATAGTTGGGTAAATAATGGACTCTCCAGACTTTTCAGATCTAGGCGTGTCCTATCATATTCATATCCATTTGCATTTTATATGTTTGGAGATGAGCTATTTAAGGATGAAATGTCAGAAGAGCAGAGGGAAATAAAACAGCACTTATTTGAGGATCAGCAGCAACAGCTCGAGGCTAATGTTGAAAAGCTTTCCAAAATTCTGGAGGAACCCTTTGAACAGTTTACAGATGACAAAGTTATGGAGATAAGGATTCAAGTCATTAACCTGTCAACCATTATCGACAATCTGTGCCAGAAAATGTATGAGTGCATTGAGAATGATTTATTGGGTTCTCTTCAATTGGGCATTCACAGTATTGCTCCATACAAGTCAAAAGGCATAGAGAGGGCATCAGAACTTTCAACTTGTTGGAACTATAAAGCCAATAATGCTGGTGGAACAGCTGAACTTGATCGGCCCTCTGGGTCTGGGAGTTCGGATGATAGTGGATGTCCTTCTCACAAGCGTGCTAGGAAAGAAGGTTCTGGTGGTGTCCTTTTTGACCTAAACTTGCCAGCGGAGGTCGTAGACAGAAATTGA 1737 0.4277 MDDYLSSDEDYHYSDQGSVEGFENDETDIQLVTPKGPTTLVITRESLLAAQKEDLRRVMEMLSLREHHARTLLIYHRWDVEKLFAVYVDKGKAALFAEAGVSVDEQCDPDPSDPSTVTCEICIEDVPSHEATRMDCGHCFCNSCWTAHFIVKINEGQSRRIRCMAHKCNAICDEAVVRNLVSKENPNMAEKFDRFLLESYIEDNKRVKWCPSIPHCGNAIRVEDDELCEVECSCGLQFCFSCLSETHSPCSCLMWELWAKKCRDESETVNWIAVHTKPCPKCHKPVEKNGGCNLVSCICGQAFCWLCGGATGREHTWSSIAGHSCGRYKQLEKTAERAKRDLYRYMHYHNRYKAHTDSFKLESKLKETIQVKVAVSEERDSTLRDYSWVNNGLSRLFRSRRVLSYSYPFAFYMFGDELFKDEMSEEQREIKQHLFEDQQQQLEANVEKLSKILEEPFEQFTDDKVMEIRIQVINLSTIIDNLCQKMYECIENDLLGSLQLGIHSIAPYKSKGIERASELSTCWNYKANNAGGTAELDRPSGSGSSDDSGCPSHKRARKEGSGGVLFDLNLPAEVVDRN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0221 578 FunFam RBR-type E3 ubiquitin transferase 113 204 - -
Lele48g0221 578 SUPERFAMILY RING/U-box 260 317 - -
Lele48g0221 578 Pfam Ariadne domain 331 578 IPR045840 -
Lele48g0221 578 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 54 403 IPR031127 GO:0004842|GO:0016567
Lele48g0221 578 FunFam RBR-type E3 ubiquitin transferase 248 495 - -
Lele48g0221 578 SUPERFAMILY RING/U-box 114 202 - -
Lele48g0221 578 Gene3D - 248 495 - -
Lele48g0221 578 SMART ibrneu5 190 252 IPR002867 -
Lele48g0221 578 SMART ibrneu5 260 325 IPR002867 -
Lele48g0221 578 MobiDBLite consensus disorder prediction 533 559 - -
Lele48g0221 578 ProSiteProfiles Zinc finger RING-type profile. 119 167 IPR001841 -
Lele48g0221 578 Pfam IBR domain, a half RING-finger domain 190 252 IPR002867 -
Lele48g0221 578 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 204 IPR013083 -
Lele48g0221 578 ProSiteProfiles TRIAD supradomain profile. 115 329 IPR044066 -
Lele48g0221 578 SUPERFAMILY RING/U-box 190 258 - -
Lele48g0221 578 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0221 Lele-ChrLele48 2246703 2250833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0221 59 526 ARIADNE family AT2G16090 75.424 0.0 751