Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0201 ATGATGACATTTGGTTCTCAGAAGGTTGGGACAAGTTTCTGGAATACTACTCCATCACCAACGAACACTTTCTGGTTTTCAAATACGAAGGAGATTCAAGATTCCATAAAGAGGCGTGAAAGTAGTGACGGTGGAAGTGATGAACAGAGTGATGGAGGTTCAAATCGCAGAAGACAAGGAAGAAGAAGATTGAAAGGAGGAAGACGTAGAGGGACAGAAAAGAAAGTGGACCAAGTGAAACAAACAGTGAAATCGAAATCATACAAAAAGAGGCACATATCACATAGAGTAAGAGCCAAGGTTATTCAAGCGCCTGACAACTACAGATCTCAGTTTACTTCCTTCAGAGCTGTCTTGAGACCTCACAACTTCTACAATAGTTTTGTGTATGTGGCAGCACGTTTTGGAGTGAAGTATACGGGAGGAGGGTCAGAGAAGATAAAGCTGGAGAACGTGAAGGGGAAGCAGGGGGAAGCTCGATGCTTTTATAGGAATGGATCAGGAAATGGAATGAACATAGGAGAAGGATGGGCCAAGTTCAAGATGGACAATGAGATCAATGAAGGAGATGTGTGTATGTTTGAGCTCGTCAAGAGGAAGGACATTGTCTTGAGAGTTCAGATATTTCGTGTCAGACATTTTGCAGATCGCTCAATTAAAGAACCTGCGCTTGTGTAA 678 0.4263 MMTFGSQKVGTSFWNTTPSPTNTFWFSNTKEIQDSIKRRESSDGGSDEQSDGGSNRRRQGRRRLKGGRRRGTEKKVDQVKQTVKSKSYKKRHISHRVRAKVIQAPDNYRSQFTSFRAVLRPHNFYNSFVYVAARFGVKYTGGGSEKIKLENVKGKQGEARCFYRNGSGNGMNIGEGWAKFKMDNEINEGDVCMFELVKRKDIVLRVQIFRVRHFADRSIKEPALV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0201 225 MobiDBLite consensus disorder prediction 35 80 - -
Lele48g0201 225 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 72 212 IPR044837 -
Lele48g0201 225 ProSiteProfiles B3 DNA-binding domain profile. 114 212 IPR003340 GO:0003677
Lele48g0201 225 SMART B3_2 115 212 IPR003340 GO:0003677
Lele48g0201 225 MobiDBLite consensus disorder prediction 35 57 - -
Lele48g0201 225 Pfam B3 DNA binding domain 119 211 IPR003340 GO:0003677
Lele48g0201 225 Gene3D - 93 214 IPR015300 -
Lele48g0201 225 SUPERFAMILY DNA-binding pseudobarrel domain 109 211 IPR015300 -
Lele48g0201 225 CDD B3_DNA 114 210 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0201 Lele-ChrLele48 2139239 2140695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0201 84 215 REM Transcription Factor Family AT1G49480 36.090 6.82e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele48g0201 B3 2.1e-14 CL0405