Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0197 ATGGCTAAGCCATATTCAAAGCAAGCCTTAGGCTGCTTCATCTTTAGCTCCTTCATTATATCTTCTCTCTCACATTTTCTTCCATCAATCCCAGAGGATAGCGATGTTTCATTAGGTTTTAATTTTGATATCCAAGTTGATGCCAATTTAACTTTTGAACATGAAAGGCTTAAACACTCCTACGTTGCTCTTCAGGCATGGAAAACTGCCATATACTCTGACCCTTTGAACACACTTGACAATTGGGTGGGTTCTGATGTATGTTCTTATAATGGTGTGTTCTGTGCTGAAGCTCTTGATGATCCTAAATTAAATGTTGTTGCTGGCATTGATCTCAACCACGCCGACATTGCGGGCCGTCTTGTACCAGAGTTAGGGCTCTTGACAGACATGGCTCTTTTCCATATCAACTCTAATAGGTTTTGTGGGATTGTCCCAGAGAGCTTTAAGAATCTCACTCTCATGTTTGAGTTTGATATTAGCAACAATAGATTCGTTGGCGTTTTCCCTTCTGTAGCCCTTACATGGCCAAACATAAAGTACCTGGATCTTAGGTATAATGATTTTGAAGGACCTTTGCCTCCACAACTGTTTGAGAAAGATATTGATGCATTGTTCTTGAACAATAATCGTTTCACTTCCACCATCCCAGAAACCCTAGGGAACTCCTCAGTCTCTGTTGTGACATTTGCTAACAACAAGTTCACAGGTTGCATTCCAAAATCAATTGGCAACATGGTGAACTTGAATGAGATTGTTTTCTTAGGCAATGATCTCGGAGGTTGCTTCCCACAAGAGATTGGATTGTTAGGAAATGTGACAATTTTAGACGTTAGCCATAATGGTTTTGTTGGGACTTTGCCAAACTTGTCAGGTTTGAAGAATGTGGAGGTAATAGACATTGCACATAATAAGATTTCTGGGTATGTGTCGGACACCATTTGCCAGCTACCGAGGTTGACCAACTTCACATTCTCTGGCAATTACTTCAATGGAGAAGCTCAATCTTGCACACCATCTTCAAGAGCAAATGTTGTTTTCAATGACAGTAATAATTGTTTGCCATTAAGGTCAGATCAAAAGACAAGCAAGCAATGTCTCCCGGTGGTGACTCGTCCTATAGATTGTAGTAAGAGCTGTGGGAGTGGTGGCAACAACCATACCCCAACAACACCTGAAACACCAAAGGTAGAGCCACCGGTTCATTCTCCTCCGCCCCCAGTCCACTCTCCACCACCACCCGCATTCTCTCCTCCGGCCCCAGTTCACTCTCCTCCACCACCAATCCAGTCTCCAACACCACCCGTGTTCTCTCCTCCGGCCCCAATTCACTCTCCTCCACCTTCACCTGTGTTCTCTCCTCCAGCCCCAGTTCACTCAGCTCCGCCTCAAGTCCAGTCTCCACCACCACCCGTGTTCTCTCCTCCCCCTCCAGTCCAATCTCCACCACCCCCAGTTAACTCTCCACCTCCACCGACAGTCCAGTCTCCACCACCCCCTGTGTTCTCTCCTCTGCCTTCCCCTGTGTTCTCTCCTCCTCCCCCAATTCACTCTCCTCCGCCTCCAGTCCAGTCTCCACCACCCCCAGTCCAATCTCCACCACCACCCATGTTCTCCCCTCCCCCTCCAGTCCAATCTCCACCACCCCCAGTTAACTCTCCACCTCCACCCCTAGCCCACTCTCCACCACCTCCAGTCCACTCTCCACCTCCACCTATTTTCTCTCCCCCGCCACCACCTAGTCCTCCTCCTCCTGCTCCTGTATTTTCTCCACCACCACCAACATGGGATGACATCATCTTGCCCCCAACCTTCGGGGCTCAATATAGGTCACCACCTCCACCGGCTATTGATGGATATTAA 1863 0.4761 MAKPYSKQALGCFIFSSFIISSLSHFLPSIPEDSDVSLGFNFDIQVDANLTFEHERLKHSYVALQAWKTAIYSDPLNTLDNWVGSDVCSYNGVFCAEALDDPKLNVVAGIDLNHADIAGRLVPELGLLTDMALFHINSNRFCGIVPESFKNLTLMFEFDISNNRFVGVFPSVALTWPNIKYLDLRYNDFEGPLPPQLFEKDIDALFLNNNRFTSTIPETLGNSSVSVVTFANNKFTGCIPKSIGNMVNLNEIVFLGNDLGGCFPQEIGLLGNVTILDVSHNGFVGTLPNLSGLKNVEVIDIAHNKISGYVSDTICQLPRLTNFTFSGNYFNGEAQSCTPSSRANVVFNDSNNCLPLRSDQKTSKQCLPVVTRPIDCSKSCGSGGNNHTPTTPETPKVEPPVHSPPPPVHSPPPPAFSPPAPVHSPPPPIQSPTPPVFSPPAPIHSPPPSPVFSPPAPVHSAPPQVQSPPPPVFSPPPPVQSPPPPVNSPPPPTVQSPPPPVFSPLPSPVFSPPPPIHSPPPPVQSPPPPVQSPPPPMFSPPPPVQSPPPPVNSPPPPLAHSPPPPVHSPPPPIFSPPPPPSPPPPAPVFSPPPPTWDDIILPPTFGAQYRSPPPPAIDGY 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0197 620 Gene3D Ribonuclease Inhibitor 59 358 IPR032675 -
Lele48g0197 620 SUPERFAMILY L domain-like 62 353 - -
Lele48g0197 620 PRINTS Proline rich extensin signature 431 448 - -
Lele48g0197 620 PRINTS Proline rich extensin signature 412 428 - -
Lele48g0197 620 PRINTS Proline rich extensin signature 450 475 - -
Lele48g0197 620 PRINTS Proline rich extensin signature 388 409 - -
Lele48g0197 620 MobiDBLite consensus disorder prediction 378 392 - -
Lele48g0197 620 FunFam Leucine-rich repeat extensin-like protein 1 61 222 - -
Lele48g0197 620 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 19 498 - -
Lele48g0197 620 Pfam Leucine rich repeat N-terminal domain 63 95 IPR013210 -
Lele48g0197 620 MobiDBLite consensus disorder prediction 377 620 - -
Lele48g0197 620 MobiDBLite consensus disorder prediction 393 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0197 Lele-ChrLele48 2115940 2117802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0197 1 500 Trihelix Transcription Factor Family AT1G49490 53.247 2.28e-178 526