LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele48g0154	ATGTCAACCGTCTCCGACCATTCCTCCGGCAACTTTCTTCAGCATGAACTCACCAAGACCACCCCTTTTCTGGGTTTAGAACTCTACATCGTTATTTGCGTTTTCCTCTTCATCTTCGTCTTTCTTGTGCTTCTGATCTTCCTCTGCATTCGCCGGAATCGAAGCTCCACGAGGCCCAGTACGCTAGCCAGCCAAAGATCCGGCGTGATTCCGTTGGTATCCAAGGAGATCGTGGAGGTCGAAGCCTTGGATCTTCTTGATATCGAAGAGAAAAAGCTTAAGGTTGAAGGTCGTGATCTGAGGAGGAAGAAGCAGGGGGAAGACGACGAGGAGATCAATGTTGGATTTCGCAGAGGAAAACAGAGGAACGATGAGAGTGATGCCGTCGAGGGTCTGAAGATAGGGTGGGGCCGTTGGTACAGCTTGGAGGAGCTTAAGCTTGCGACAAGTGGATTCGCCGACGAGAATGTTATCGGAGAAGGTGGTTATGGAATTGTATACAGAGGAATTCTTCCAGATGGTTCTGTAGTTGCTGTGAAGAAACTTCTGAACAACAAGGGTCAAGCAGAGAAGGAGTTTAAGGCGGAGGTTGAAGCTATTGGAAAAGTAAAGCATAAAAATTTAGTTGGTTTAATAGGATATTGTGCAGAAGGTGCTCAAAGGATTCTTGTTTACGAATATGTTGAGAATGGAAACTTGGAGCAGTGGTTGCATGGTGAGGTAGTGCCTGCTAGCCCCTTAACTTGGGACATACGTATGAGGATCGCCATAGGGACGGCAAAAGGACTAGCCTATTTGCATGAAGGGTTAGAACCCAAAGTTGTGCACCGAGACGTGAAATCTAGTAACATTCTTCTCGACAAAAGATGGAACGCCAAGGTATCGGACTTTGGACTGGCCAAACTCTTAGGACCTGAGAAAAGCTACGTGTCTACACGCGTAATGGGGACATTCGGATATGTCTCGCCTGAGTATGCGAGCACGGGTATGCTTAATGAAGGTAATGATGTGTACAGTTTTGGAGTTCTGCTGATGGAGATAATTACCGGAAGAAGTCCTATTGATTATTCTAGATCGCCGGCAGAGATGAACTTGGTTGACTGGTTCAAGGGAATGGTGGCGAGTCGTCGTGGGGATGAGCTAGTAGATCCTTCGATCGAGATTAAGCCCTTTCCGAGATCACTGAAGCGAGCTTTGCTGGTTTGTCTGCGCTGCATAGATATAGATGTCTGTAAGCGGCCAAAGATGAGTCAAATAGTTCATATGCTTGAGGCAGATGATTTTCCCTTTCGTTATGAACTTCGGGCAGCTAGAGAGAGAGATTCTGTTCCTTCTCATGCATCTGTTTCCAACAAAATTTCATATCCACCAAAGCATTTGGAGTCAGTTGAGAGATCAAGATGGCGATGA	1410	0.4645	MSTVSDHSSGNFLQHELTKTTPFLGLELYIVICVFLFIFVFLVLLIFLCIRRNRSSTRPSTLASQRSGVIPLVSKEIVEVEALDLLDIEEKKLKVEGRDLRRKKQGEDDEEINVGFRRGKQRNDESDAVEGLKIGWGRWYSLEELKLATSGFADENVIGEGGYGIVYRGILPDGSVVAVKKLLNNKGQAEKEFKAEVEAIGKVKHKNLVGLIGYCAEGAQRILVYEYVENGNLEQWLHGEVVPASPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGPEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDELVDPSIEIKPFPRSLKRALLVCLRCIDIDVCKRPKMSQIVHMLEADDFPFRYELRAARERDSVPSHASVSNKISYPPKHLESVERSRWR	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele48g0154	469	SUPERFAMILY	Protein kinase-like (PK-like)	137	432	IPR011009	-
	Lele48g0154	469	FunFam	Probable serine/threonine-protein kinase At1g01540	132	227	-	-
	Lele48g0154	469	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	274	286	IPR008271	GO:0004672\|GO:0006468
	Lele48g0154	469	FunFam	Putative receptor-like serine/threonine-protein kinase	228	438	-	-
	Lele48g0154	469	Gene3D	Phosphorylase Kinase; domain 1	118	227	-	-
	Lele48g0154	469	Gene3D	Transferase(Phosphotransferase) domain 1	228	434	-	-
	Lele48g0154	469	PANTHER	OS01G0323000 PROTEIN	9	443	-	-
	Lele48g0154	469	ProSitePatterns	Protein kinases ATP-binding region signature.	158	181	IPR017441	GO:0005524
	Lele48g0154	469	CDD	STKc_IRAK	158	424	-	-
	Lele48g0154	469	Pfam	Protein kinase domain	153	421	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele48g0154	469	SMART	serkin_6	152	430	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele48g0154	469	ProSiteProfiles	Protein kinase domain profile.	152	431	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele48g0154	Lele-ChrLele48	1798682	1801428	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele48g0154	139	425	Trihelix Transcription Factor Family	AT5G38560	48.123	2.07e-90	287

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Lele48g0154		Pkinase	8.4e-46	CL0016