Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0150 ATGCATGGGATCCACAGTAAGCGTACACAGTTAACCACAGCTAACCACGGTACATGTGCTGGCGCATTCTGCCTGGATGTTGAGTTCCGCTGCTTCGTCGGTGGGCTCGCTTGGGCTACCGACAACGATGCCCTTGGCAAGGCCTTTGCTCCTTTCGGCGATGTTATCGAATCGAAGATTATCAACGATCGCGAGACCGGAAGGTCCAGAGGGTTCGGATTTGTGACCTTCTCCTCAGAGCAGTCCATGAGGGATGCAATCGATAGCATGAACGGTCAGAGCCTTGATGGCCGGAACATTACGGTGAACGAAGCTCAGTCTCGTGGTGGAAGAGGCGGCGCCGGCGGCGGTTACGGCAGTGGGGGTGGTTATGGCCGTGGTGGAGGCGGACATGGAGGTGGTGGGCGCCGTGAGGGTGGATACTACAGGAATAGTGGAGGATATGGCAATGGCGCCGGTTATGGTGACCGTGGATCTCGCTACTCTCGGGGTGGTGATTACGATGGAAACTGGAGGAATTAA 522 0.5632 MHGIHSKRTQLTTANHGTCAGAFCLDVEFRCFVGGLAWATDNDALGKAFAPFGDVIESKIINDRETGRSRGFGFVTFSSEQSMRDAIDSMNGQSLDGRNITVNEAQSRGGRGGAGGGYGSGGGYGRGGGGHGGGGRREGGYYRNSGGYGNGAGYGDRGSRYSRGGDYDGNWRN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0150 173 FunFam Glycine-rich RNA-binding protein GRP1A 23 134 - -
Lele48g0150 173 MobiDBLite consensus disorder prediction 127 173 - -
Lele48g0150 173 SUPERFAMILY RNA-binding domain, RBD 29 138 IPR035979 GO:0003676
Lele48g0150 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 107 IPR000504 GO:0003723
Lele48g0150 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 32 100 IPR000504 GO:0003723
Lele48g0150 173 SMART rrm1_1 30 103 IPR000504 GO:0003723
Lele48g0150 173 PANTHER GEO13361P1-RELATED 26 165 - -
Lele48g0150 173 Gene3D - 5 125 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0150 Lele-ChrLele48 1763620 1764574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0150 32 112 Eukaryotic Initiation Factors Gene Family AT1G22760 37.037 8.45e-11 57.8