Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0147 ATGATAAAAGAACTGTACAGTACCGTTAGGGGCAGCGAGTGGGATACACATGCCCCAAATGGGAGAGGATTTGGGCGGGGTGCCCTTGGCCATCGCAAAGTCCAAGGTAACAAGTACCCATCAACGGCGGAGGGATGCGAGGATGATTACCCCCGCTCTCAGCTCTCCACGTCAGGACTGACATGTCAGAAATATGGCCCTCCCACTGCCACGTGGACCACCCATGTGACTGGCAGATACCACTTAGTCCACTCACTCACTGTTTACGTTATCCACATAGCTTCTTATGTTAATATGTTGCGTTGCCTAAAAAGTTCGGAGAATCTCGCCGAGTCCTGCTCTGATATGACATTGTTAGCAAGGCAGAGAGACAGGATGAAATGGCAACAACCACAGTCTCATCATCATCAGAACCAGAGCAGCTACTTTTCTGGGAGTGGGTTTGACTGTGGCTTTTCGTCTCTGCAAGTTCCGAGTTCCGGGGGGTTGATGATGATGAATGGCAGTGTTACCGGCGGTTCTGGGCCCGGTGAGGTGGCTGCTAATGCTGGCTCGGTGAAGCCCGACCCGGGTTGGGAAAATGGGTGGCCCGAATTGGGCAAGGTCGAGTTGCCTGGTATAGGATTCGTGTCCTCTGGATTTAACGTTAGCTCTGCAATTTCAAGGACCTCTAGCTGCCCGCCCTCTGTGGCGGCGGCGGTGGCAGCCACCACGCCGACAACAACGGAGAAGATGAGATCGACAAGTGGGAGAGAGATCTTCAAGAAGAGGAAATCTGATAAAGCTCAGATCCCCAAGGGTGTTGCAGAAAATGAGAAGAAGAAAAACAAAACAAGTGGGGAGGAAGGTGATCAATCCAAAGTCACAACGGACAATAATAATAGTAATAATGACAAGAACAGAGAAACATCTACAGAATCTTCGAAAGAGAATTCAAAAGCATCAGAGGTTCAAAATCAAAAGCCTGACTACATTCATGTGCGAGCACGTCGTGGACAAGCCACTGATAGCCATAGCTTAGCCGAAAGAGTTAGAAGGGAAAAAATTAGCGAGAGGATGAAGTACTTGCAAGGTTTAGTTCCTGGTTGTAACAAAATCACAGGAAAAGCTGGCATGCTCGATGAAATCATCAATTATGTTCAATCTCTTCAACGACAAGTAGAGGTTAGAGACGAGACATTGCCCACGTCATCATTTTCCTTTAAGTTTTTGTCAATGAAACTAGCTGCTGTAAACCCGAGGATTGAATTCAACGTTGACGATATGTTTACCAAAGAGGTTTTTCCTGCCTGTGCTCCTACGGGTTTTCCAACCATAGATATGACTCCTAATCCTGCATATCTTCAGTTTGATCCAACACAACATGTAGCTTCATGTTCCGGATTAGATATGGGCATAATAAACCCTCCAGATTTGGGGCTTCGAAGGACCATTAGTGCCCCTGTTTCCTTGCCACACGAAACGTTTCTTGACTCATCCTGTTTCAATCAAATTCTGCCATTTTCAACCTGTGAAGGTTATTTGCAGAACCTGTACAATGTGGCTTTTGATCAAGCCAGATCAACAACGTCGACCTTTCCTTCTCAGCCATTCACAGGCCTAATTGAAGCTAGCAATCCAAAGATGGAGATGTTAAGAAAAAGGGAGGATTTTGAGGTTGTGAACCGAAGAAAGGCAATTAACGTGATTATGGCGGGTGAACCAGAAAGACGAATGAAGATGCTTGAGAGAGACAGAAGACAAAATCATGAAAGTGGACCTTATAAAGGGCAGCTTTGGGGACAGAATAATAGTCAGTTGATTGAGACAGAAAATAGCAAAGGCATATAA 1830 0.4612 MIKELYSTVRGSEWDTHAPNGRGFGRGALGHRKVQGNKYPSTAEGCEDDYPRSQLSTSGLTCQKYGPPTATWTTHVTGRYHLVHSLTVYVIHIASYVNMLRCLKSSENLAESCSDMTLLARQRDRMKWQQPQSHHHQNQSSYFSGSGFDCGFSSLQVPSSGGLMMMNGSVTGGSGPGEVAANAGSVKPDPGWENGWPELGKVELPGIGFVSSGFNVSSAISRTSSCPPSVAAAVAATTPTTTEKMRSTSGREIFKKRKSDKAQIPKGVAENEKKKNKTSGEEGDQSKVTTDNNNSNNDKNRETSTESSKENSKASEVQNQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQGLVPGCNKITGKAGMLDEIINYVQSLQRQVEVRDETLPTSSFSFKFLSMKLAAVNPRIEFNVDDMFTKEVFPACAPTGFPTIDMTPNPAYLQFDPTQHVASCSGLDMGIINPPDLGLRRTISAPVSLPHETFLDSSCFNQILPFSTCEGYLQNLYNVAFDQARSTTSTFPSQPFTGLIEASNPKMEMLRKREDFEVVNRRKAINVIMAGEPERRMKMLERDRRQNHESGPYKGQLWGQNNSQLIETENSKGI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0147 609 MobiDBLite consensus disorder prediction 285 301 - -
Lele48g0147 609 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 241 440 IPR024097 GO:0006355
Lele48g0147 609 MobiDBLite consensus disorder prediction 221 247 - -
Lele48g0147 609 MobiDBLite consensus disorder prediction 221 341 - -
Lele48g0147 609 Pfam Helix-loop-helix DNA-binding domain 337 384 IPR011598 GO:0046983
Lele48g0147 609 MobiDBLite consensus disorder prediction 578 609 - -
Lele48g0147 609 CDD bHLH_AtBPE_like 323 422 - -
Lele48g0147 609 MobiDBLite consensus disorder prediction 248 284 - -
Lele48g0147 609 SMART finulus 339 389 IPR011598 GO:0046983
Lele48g0147 609 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 392 IPR036638 GO:0046983
Lele48g0147 609 FunFam Basic helix-loop-helix transcription factor 330 416 - -
Lele48g0147 609 MobiDBLite consensus disorder prediction 323 341 - -
Lele48g0147 609 Gene3D - 330 396 IPR036638 GO:0046983
Lele48g0147 609 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 383 IPR011598 GO:0046983
Lele48g0147 609 MobiDBLite consensus disorder prediction 588 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0147 Lele-ChrLele48 1732721 1738087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0147 247 512 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 45.230 7.08e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele48g0147 HLH 1.6e-05 No_clan