Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0132 ATGGCTCCCAAGAAGGACAAGGGTCCCGCTCCGTCCTCGAAACCGGCCAAGTCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAAGAGAAGGTAAATAACATGGTGCTATTCGATCAGGCCACCTATGACAAGCTCCTGTCTGAGGCACCAAAATACAAGCTCATCACACCTTCCATCCTCTCTGATCGTTTGAGGATCAATGGATCACTAGCAAGGAAGGCCATTAGAGAATTGATGGCTAGAGGCTCAATTAGGATGGTATCTTCACACTCTAAGCATTTGCAAAGATTGAAGTCTTCTGATTCCACATCATCATCATCATCAATTAGCCAGCAGCTCAATGGCTTGCAGGATTTGCATGGCTATGCCACTGAGATTCTTCAATTGCCAACCACACAACGAGCCATGTTCTCTGAGGATCTTAGATATTTGCAGTACTTCTAA 462 0.4632 MAPKKDKGPAPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSSHSKHLQRLKSSDSTSSSSSISQQLNGLQDLHGYATEILQLPTTQRAMFSEDLRYLQYF 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0132 153 PANTHER 40S RIBOSOMAL PROTEIN S25 1 99 IPR004977 -
Lele48g0132 153 FunFam 40S ribosomal protein S25 21 106 - -
Lele48g0132 153 MobiDBLite consensus disorder prediction 1 36 - -
Lele48g0132 153 Pfam S25 ribosomal protein 11 99 IPR004977 -
Lele48g0132 153 Gene3D - 21 101 - -
Lele48g0132 153 MobiDBLite consensus disorder prediction 95 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0132 Lele-ChrLele48 1651606 1655143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0132 1 97 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.784 1.22e-46 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1280 45 22672831 22676209 Lele48g0132 48 1651606 1655143 hybridization
Lele46g1378 46 20698492 20699979 Lele48g0132 48 1651606 1655143 hybridization