Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0124 ATGATGGCTTCCTCAAGTGGAACATCTTCAGGTTCAGGTTCAGGTTCACCGTCTCTAGTTCATAACTCCGGTTCAGAGGAGGATTTGCAGGTTTTGATGGATCAGAGGAAGAGGAAGAGGATGATATCGAATCGTGAGTCAGCGAGGCGATCTCGGATGAGGAAACAGAAGCATCTGGACGATCTGGTGGCTCAAGTGGCTCATCTCAGAAAAGAGAATCAGCAGATTCTCACGAGTGTGAATCTCACAACAGAACAGTTCTTAAGAGTTGAATCTGAAAACTCTGTTCTTCGAGCTCAAGCGAGTGAGCTGAGTCACAGGCTGGAATCTCTGAACGAAATAATCGATTACTTGAATGCAAACAACAATGGAGGTTTTGCAAACAGCTTCATGGAGCCCAACAACAATGGCGGATTCTTCAATCCGATGAACATGGGATATCTGAACCATCCGATAATGGCTTCTGCAGATTTATGGCCGTAA 483 0.4534 MMASSSGTSSGSGSGSPSLVHNSGSEEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAHLRKENQQILTSVNLTTEQFLRVESENSVLRAQASELSHRLESLNEIIDYLNANNNGGFANSFMEPNNNGGFFNPMNMGYLNHPIMASADLWP 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0124 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 34 97 IPR004827 GO:0003700|GO:0006355
Lele48g0124 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 39 54 IPR004827 GO:0003700|GO:0006355
Lele48g0124 160 Gene3D - 34 89 - -
Lele48g0124 160 FunFam Basic region/leucine zipper protein 34 116 - -
Lele48g0124 160 Coils Coil 94 121 - -
Lele48g0124 160 Pfam bZIP transcription factor 36 89 IPR004827 GO:0003700|GO:0006355
Lele48g0124 160 SUPERFAMILY Leucine zipper domain 36 88 IPR046347 GO:0003700|GO:0006355
Lele48g0124 160 MobiDBLite consensus disorder prediction 1 29 - -
Lele48g0124 160 MobiDBLite consensus disorder prediction 1 56 - -
Lele48g0124 160 SMART brlzneu 32 96 IPR004827 GO:0003700|GO:0006355
Lele48g0124 160 MobiDBLite consensus disorder prediction 30 56 - -
Lele48g0124 160 CDD bZIP_plant_GBF1 37 87 IPR045314 GO:0003700|GO:0006355
Lele48g0124 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0124 Lele-ChrLele48 1595695 1596177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0124 32 157 bZIP Transcription Factor Family AT4G34590 59.398 5.88e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele48g0124 bZIP_1 2.3e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1289 45 22732521 22732997 Lele48g0124 48 1595695 1596177 hybridization
Lele46g1387 46 20750013 20750559 Lele48g0124 48 1595695 1596177 hybridization