Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0114 ATGGGCGACGCACGGCGCGGAGGTTGTTGTTGCCCGCCGATGGATCTTTTCCGGTCGGAGCCGATGCAGCTGGTCCAGCTCATCATTCCTATGGAGTCCGCTCACCTTACTGTCTCCTACCTCGGTGATCTAGGTCTTCTTCAGTTCAAAGATCTCAATGTTGAGAAGAGCCCTTTTCAACGGACTTATGCAAGTCAGCTAAAAAGATGTGGAGAGATGGCACGGAAATTACGATTTTTCAAGGATCAAATGTTGAAGGCTGGTGTTTCACCTACAACCTTTGCTACTCAAGTTGACGTGAACATAGATGATTTAGAGGTAAAACTTGCTGACCTTGAGGCAGAGTTAACTGAGATGAATGCGAATGGTGAAAAGTTGCAACGCTCTCACAATGAACTTGTGGAATATAAGCTTGTTCTTCAAAAGGCTGGCGAGTTTTTCCATTCAGCTCAGAATCGTGCCTTGGAGCAGCAGAGAGAACTTGAATCACGTCAGAGTGGAGAATCTATGGAAACACCATTTTTACAAGATCAAGAAATGTCAACAGACTCAAAGCAAGTGAAGTTGGGTTTTCTAGCTGGTCTTGTTCCAAGGGAAAGATCCATGGCATTTGAGAGAATTTTATTTCGTGCTACTAGGGGCAATGTGTTTCTGAGGCAAGTCGTTGTTGAGGATCCTGTCACTGACCCTGTTTCTGGAGAAAAGGTTGAGAAAAATGTATTTTTAGTCTTCTATGCTGGTGAAAGAGCAAAAGCCAAGATTCTGAAAATATGTGAAGCATTTGGGGCTAATCGTTATCCTTTTGCTGAGGAATCAGGAAAACAAGCTCAAATGATTGCAGAGGTTTCAGCAAGACTCTCAGAGTTGAAGACTACTATAGATGCTGGACTGCTGCACCAGGGTAACTTGCTACAGGCTATTGGGGCTCAATTTAATCTGTGGAATCTTTTGGTGAGAAAGGAGAAATCCGTATATCATACCCTGAACATGCTTAGCCTTGATGTGACCAAAAAATGCCTTGTGGCTGAGAGTTGGAGTCCTGTTTTTGCAACAAAGCAGATACAGGATGCCTTGGAACGCGCAGCATTTGACTCTAACTCCCAAGTTGGTACCATTTTCCAAGTTTTGCATACTAGGGAGCCACCGCCCACCTATTTCCGGACAAATAAATTCACTTCTTCATTTCAGTCCATTGTTGATGCATACGGGTGA 1212 0.4406 MGDARRGGCCCPPMDLFRSEPMQLVQLIIPMESAHLTVSYLGDLGLLQFKDLNVEKSPFQRTYASQLKRCGEMARKLRFFKDQMLKAGVSPTTFATQVDVNIDDLEVKLADLEAELTEMNANGEKLQRSHNELVEYKLVLQKAGEFFHSAQNRALEQQRELESRQSGESMETPFLQDQEMSTDSKQVKLGFLAGLVPRERSMAFERILFRATRGNVFLRQVVVEDPVTDPVSGEKVEKNVFLVFYAGERAKAKILKICEAFGANRYPFAEESGKQAQMIAEVSARLSELKTTIDAGLLHQGNLLQAIGAQFNLWNLLVRKEKSVYHTLNMLSLDVTKKCLVAESWSPVFATKQIQDALERAAFDSNSQVGTIFQVLHTREPPPTYFRTNKFTSSFQSIVDAYG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0114 403 PANTHER VACUOLAR PROTON ATPASES 16 403 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele48g0114 403 Coils Coil 95 129 - -
Lele48g0114 403 Pfam V-type ATPase 116kDa subunit family 40 403 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0114 Lele-ChrLele48 1525685 1530756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0114 14 403 Primary Pumps ATPases(2) AT4G39080 74.745 0.0 608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1299 45 22796811 22804805 Lele48g0114 48 1525685 1530756 hybridization
Lele46g1397 46 20810128 20818064 Lele48g0114 48 1525685 1530756 hybridization