Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0091 ATGGTCACTTTTGTGAGCCATGAAAACAGGGTAGGTTATGGAAGTAAAAATGAATGCAAGAAGAGGACCACATGGGAAGCCTTGAGTTTGTTGAGGCACCTATTTGTAGCAGCCAACACTACACAAGTGGATAATCCAATATGTATTAGGAGTGAGGAGTCAAAAGCTGCAAAGGAAGAAACAGAGACGCATGGGTTTCTGCAAAAATGATCACTTATCATCCTCTCTCTCATGGCCATTAGGAAACCCAGCAAGCTTCCTCAGACTGCAGTTCTGAAACAAATCCTCAAGAGATGTTCAAGCTTGGGAAAGAAAAATGGCTATGATGATGATGGACTCCCTCTTGACGTCCCAAAAGGGCATTTTGCTGTGTATGTTGGTGAGAACAGAAGTAGGTATATTGTGCCTATCTCCTTTTTGACTCACCCAGAATTTCAGTCCCTCCTTCGTCAGGCTGAAGAAGAATTTGGCTTCGATCATGATATGGGTCTCACTATCCCTTGTGAGGAAGTTGTTTTCAGGTCCCTAACATCAATGCTTAGATGA 546 0.4304 MVTFVSHENRVGYGSKNECKKRTTWEALSLLRHLFVAANTTQVDNPICIRSEESKAAKEETETHGFLQKXSLIILSLMAIRKPSKLPQTAVLKQILKRCSSLGKKNGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0091 181 Pfam Auxin responsive protein 109 180 IPR003676 GO:0009733
Lele48g0091 181 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 115 179 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0091 Lele-ChrLele48 1326762 1330356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0091 114 176 Calmodulin-binding Proteins AT3G43120 57.143 2.88e-20 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1323 45 22994599 22994913 Lele48g0091 48 1326762 1330356 hybridization