Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0089 ATGGGTTTTCGCTTACCGGGAATTAGAAGAGCCTCTTCATTTTCAAGAAGCTTTGCATCTTCAAAGGGAGTCGCCGTGCCAAAGGGCTACCTTGCAGTCTATGTTGGAGAGAAAATGAAGAGGTTTGTGATTCCCATAGCATACTTGAACCAACCCTTGTTTCAAGATTTGCTAAGTCAAGCTGAGGAAGAGTTTGGTTACGATCATCCCATGGGTGGCCTCACAATTCCTTGCACTGAAGATGCCTTCGAGAATATAACTTCTTGCTTGAATGATTGCTGA 282 0.4397 MGFRLPGIRRASSFSRSFASSKGVAVPKGYLAVYVGEKMKRFVIPIAYLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCTEDAFENITSCLNDC 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0089 93 Pfam Auxin responsive protein 13 90 IPR003676 GO:0009733
Lele48g0089 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 20 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0089 Lele-ChrLele48 1308565 1308846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0089 26 92 Calmodulin-binding Proteins AT3G43120 52.239 1.51e-20 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1325 45 23010116 23010397 Lele48g0089 48 1308565 1308846 hybridization