Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0070 ATGTTTTCTTCTTCCTCCTCTAATTCCATCGTCTTCGTCCAACCCTTCTTTCCATCTTCTCATCTCAAAGCCCCTAAAGCCCAGAGAGCTTATTTTCCCGGGAAAATCTCTGCATCTTACACTGCGACTGACAACAGAGGAAACAGAGCATTCGCGACCATGGCTTCCTCTGCCTCTGCATCTCTGTACGACGTGCTCGGGATCTCAATGGGTGCTAGCGGCAACGAGATAAAAGCCGCTTATAGGAAGCTTGCGAGAACGTGTCATCCTGACGTGGTGGCCATGAATCAGAAGGAAACCTCGGCCAACGAGTTCATGGAGATCCATTCGGCTTATTCCACGTTGTCGGATCCCAGCAAGCGAGCTCAATATGACAGACAACTCTATGGCCATAATCACAGAAGGCCTCTTACTTCTTCAAATATAGCTTCTATGTCTGGGCATCGTCCTAGATATGCTCACTCTGGAATGAGCTGGGAAACTGATCAGTGTTGGTAG 498 0.4859 MFSSSSSNSIVFVQPFFPSSHLKAPKAQRAYFPGKISASYTATDNRGNRAFATMASSASASLYDVLGISMGASGNEIKAAYRKLARTCHPDVVAMNQKETSANEFMEIHSAYSTLSDPSKRAQYDRQLYGHNHRRPLTSSNIASMSGHRPRYAHSGMSWETDQCW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0070 165 PRINTS DnaJ domain signature 63 81 IPR001623 -
Lele48g0070 165 PRINTS DnaJ domain signature 81 96 IPR001623 -
Lele48g0070 165 PRINTS DnaJ domain signature 100 120 IPR001623 -
Lele48g0070 165 Gene3D DnaJ domain 48 145 IPR036869 -
Lele48g0070 165 Pfam DnaJ domain 62 125 IPR001623 -
Lele48g0070 165 ProSiteProfiles dnaJ domain profile. 61 128 IPR001623 -
Lele48g0070 165 ProSitePatterns Nt-dnaJ domain signature. 105 124 IPR018253 -
Lele48g0070 165 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 15 155 - -
Lele48g0070 165 SUPERFAMILY Chaperone J-domain 32 124 IPR036869 -
Lele48g0070 165 CDD DnaJ 63 117 IPR001623 -
Lele48g0070 165 SMART dnaj_3 60 120 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0070 Lele-ChrLele48 1176143 1176640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0070 54 125 C2H2 Transcription Factor Family AT1G74250 43.038 1.62e-10 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele46g1442 46 21207875 21208213 Lele48g0070 48 1176143 1176640 hybridization