Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0059 ATGGGAAGGTCTCCTTGTTGTGAGAAAGCCCATACCAACAAAGGCGCCTGGACCAAGGAGGAAGACGATCGCCTCATCGCTTATATCCGCGCTCACGGCGAGGGTTGCTGGCGCTCCCTCCCCAAAGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATCAACTACCTCCGACCTGACCTCAAACGTGGCAATTTCACCGAAGAAGAGGACGAGCTCATCATCAAACTCCACAGTCTTCTCGGCAACAAGTGGTCTCTCATAGCCGGAAGGTTACCGGGAAGAACAGACAATGAGATAAAGAACTACTGGAACACCCACATCAGAAGGAAGCTCTTGAACAGAGGAATCGACCCTTCCACTCACCGGCCTCTGAATGAGCCCGCCAATTCTGCCCAGAACATTCAAGAAGCAGCCGCCACCATCTCTTTCGCCTCGCATGTTAAACAAGAGAGCAGTGACGACAACAAGGCAAACGTGTTCGTGGAGCTTCACAGAGATGCAAAAAGGGGTGTAGCAGTAGAACGATGCCCTGACCTGAACCTGGAGCTCACCATTAGTCCTCCTCATCAAATCCAGGAGGCAGAGGATCAAGTTCATCAGCCAATACTCAAGAGTGGCGGAGGAAGAAGAAGCCTCTGTTTCGCTTGCAGTTTGGGGTTGCAGAATAGCGAGGATTGCAGCTGTGGAATCGTCGGCAGCATTAATGGGAGCACCGGCGGGAGTAGTAGCGGCGCCGGTGGGTATGATTTCTTGGGGCTGAAAAGTTCTGTTTTGGATTACAGAAGCTTGGAGATGAAATGA 816 0.5343 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNEPANSAQNIQEAAATISFASHVKQESSDDNKANVFVELHRDAKRGVAVERCPDLNLELTISPPHQIQEAEDQVHQPILKSGGGRRSLCFACSLGLQNSEDCSCGIVGSINGSTGGSSSGAGGYDFLGLKSSVLDYRSLEMK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0059 271 SMART sant 66 114 IPR001005 -
Lele48g0059 271 SMART sant 13 63 IPR001005 -
Lele48g0059 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele48g0059 271 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 161 - -
Lele48g0059 271 Gene3D - 14 66 - -
Lele48g0059 271 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele48g0059 271 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele48g0059 271 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele48g0059 271 FunFam Myb transcription factor 68 137 - -
Lele48g0059 271 FunFam MYB-related transcription factor 13 66 - -
Lele48g0059 271 Gene3D - 69 144 - -
Lele48g0059 271 CDD SANT 16 61 IPR001005 -
Lele48g0059 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele48g0059 271 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele48g0059 271 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele48g0059 271 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0059 Lele-ChrLele48 1111682 1112585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0059 1 271 MYB Transcription Factor Family AT4G38620 59.107 3.71e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele48g0059 Myb_DNA-binding 3.8e-14 CL0123