Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0051 ATGACAAACAGAAAAACAGTTCATGTTCTTCATCTTTTGAGCTACAAAGGAATTGGAGGGGATTTTGGACGTGAATTCATTGATTTCAAGTGGTTTAACTTTGAGGATCTCAAGTCCTGGACTTCTCATTTCTCTTCAGGAAATCTGGTTGGTAAAGGAGGCAGTAACCGTGTGTACAAAGGGATTATCCCTGATGGAAAACCAATTGCAGTCAAAGTTTTAGAGTCATCAAAAGAAGCTTGTAAAGATTTTGCACAGGAAGTGGAAATAATATCCTCTTTGAGGCACAAATACATAACCCATTCTTGGAATTTGAATTGCAGAAGATGCTTTAATTCTGTCTACGAGTTTCTCCCCAAAGGAAGCTTAGAGGAAAATTTACACGGTGAGAACAAGGATGGATCCATATTGTCACGGCAAGTTAGATTTAATATGGCAGTTGGTATAGCAGAAGCCTTCAATTACCTTCACAACGAAACTTCAAAGCCTGACATACACAGGGATGTTAAGTCTTCAAATGTTCTTCTCTCTCCCATGGGTTTGAACCACAAGTTCATATTTTCTGACACAAGAAGATGTAGTGGGAACATTCGGATATCTTGTTCCTGA 609 0.3875 MTNRKTVHVLHLLSYKGIGGDFGREFIDFKWFNFEDLKSWTSHFSSGNLVGKGGSNRVYKGIIPDGKPIAVKVLESSKEACKDFAQEVEIISSLRHKYITHSWNLNCRRCFNSVYEFLPKGSLEENLHGENKDGSILSRQVRFNMAVGIAEAFNYLHNETSKPDIHRDVKSSNVLLSPMGLNHKFIFSDTRRCSGNIRISCS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0051 202 Gene3D Phosphorylase Kinase; domain 1 24 107 - -
Lele48g0051 202 Gene3D Transferase(Phosphotransferase) domain 1 118 200 - -
Lele48g0051 202 SMART serkin_6 44 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0051 202 Pfam Protein kinase domain 46 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0051 202 PANTHER OS08G0249100 PROTEIN 29 177 - -
Lele48g0051 202 ProSiteProfiles Protein kinase domain profile. 44 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele48g0051 202 SUPERFAMILY Protein kinase-like (PK-like) 27 178 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0051 Lele-ChrLele48 1062472 1063351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0051 29 176 Receptor kinase-like Gene Family AT3G58690 38.710 8.38e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele48g0051 Pkinase 8.2e-18 CL0016