Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0050 ATGGATGACGGTGATCTTGATTTCCCAAACCAGGAAACGTTCCCCGGTCTAAACATGGAAGAACTTCAAAGTAGTTGCTCAATGGATAGTTTCTTCGAAGAGCTTTTAAAGGACGCACATGCTTGCACGCACACTCACACTTGCAACCCTCCTGGCCCTGACAATTCACATACCCACACTTGTTATCACGTGCACACCAAAATTGTTCCAGCAACTTCTGAAGAAAAGGTTGGCACTGATGATAGTACTGGTACAGAATCTGCAGAAAAGCCAAAAAAACGTTCTTCAGGTAATCGTGAAGCAGTTCGCAAATACCGTGAGAAGAAGAAGGCACGAACTGCATCTTTGGAGGATGAGGTTGTAAAATTGAGAGCTTTGAATCAACATTTGTTGAAGAGGTTGCAAGGTCAGTCTGCATTAGAGGCTGAAATTGCAAGGCTAAAGTGCTTGCTAGTAGACATTCGAGGAAGGATTGATGGGGAGATTGGATCATTTCCATATCAGAAATCAACTAATTTGAACATGCCAACTGCACACTCGCCTGGTTCCTATTTGATGAATCCTTGTAATGTGCAATGTGGCGATCAGGTCTATTGTCTTCATCCAGGAGCAGATGGCAAGAATACAGAACATTTATCAACTAACGGGCAAGAATCGAATGGTTGTGAATTTGAAAGCATCCACTGCCCATCAAACAAGAATTTGGGCCTCGAGGATCTTTCTGGCTGTGGAGTTGGACAGGAAGTGTCTAATATCAATTTTTCTAAAGCAAATAAAAGAAAAGGTGAAGCCTTATCTCTCTCTCTCTCTCTCTCTCTGATTCTAGCATGGATTATTGATTTCATACCAAGCTTGATGCCATTCAAATGGCTGGGAGAACTCGAGCAGCAATGGCTAGTTAAAGAGGCAAATGATATGACAATGGTGGTTTTCATCATCCTCATGGTACATACTTTCCACCAATAA 966 0.4224 MDDGDLDFPNQETFPGLNMEELQSSCSMDSFFEELLKDAHACTHTHTCNPPGPDNSHTHTCYHVHTKIVPATSEEKVGTDDSTGTESAEKPKKRSSGNREAVRKYREKKKARTASLEDEVVKLRALNQHLLKRLQGQSALEAEIARLKCLLVDIRGRIDGEIGSFPYQKSTNLNMPTAHSPGSYLMNPCNVQCGDQVYCLHPGADGKNTEHLSTNGQESNGCEFESIHCPSNKNLGLEDLSGCGVGQEVSNINFSKANKRKGEALSLSLSLSLILAWIIDFIPSLMPFKWLGELEQQWLVKEANDMTMVVFIILMVHTFHQ 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0050 321 Gene3D - 79 154 - -
Lele48g0050 321 SMART brlzneu 86 153 IPR004827 GO:0003700|GO:0006355
Lele48g0050 321 MobiDBLite consensus disorder prediction 72 114 - -
Lele48g0050 321 CDD bZIP 98 145 - -
Lele48g0050 321 Pfam Basic region leucine zipper 87 143 IPR004827 GO:0003700|GO:0006355
Lele48g0050 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 135 IPR004827 GO:0003700|GO:0006355
Lele48g0050 321 Coils Coil 106 126 - -
Lele48g0050 321 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 166 - -
Lele48g0050 321 MobiDBLite consensus disorder prediction 79 104 - -
Lele48g0050 321 SUPERFAMILY Leucine zipper domain 90 136 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0050 Lele-ChrLele48 1057522 1059136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0050 1 263 bZIP Transcription Factor Family AT2G16770 59.470 8.55e-103 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele48g0050 bZIP_2 3.8e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g1365 45 23261738 23264112 Lele48g0050 48 1057522 1059136 hybridization
Lele46g1460 46 21336063 21337618 Lele48g0050 48 1057522 1059136 hybridization