Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0027 ATGGATTTCGCGCTCAGGAAGTCCTTCAAGTCCTATGGTTCGCTCAAGCGTTCCACCAAGCTTTCCGCTGGGGACAGCGCTGACGCTGGGCGCGAAGACATGCCCATTCTCTTTGAACAAGATCCATCCTCTCCCGAACATAATCCTCCTCAACCCCACGCCACTCCTTCCTCCTCCATGACCTCCCCCGACAGGCCCACCTACTGCGGAGACGTCATCGTCAAGATCGACGACAGCGACTCCAAATCCTCCAAAGCCGCCTCCAGCTCCCAGGGCGAAGCCAAGGTTTGGCGGGATCTCGGCTGCGACTTCTTGAGAGAAGGTGACATCACCCCCACCAAGCATGGGCACAGTTTCGATTTCCAGCAACCCGGCCCCAAACTCGAGGACCCTCCCTCCAGGCTCATTGGTAAATTCTTGCACAGACAGAAGCTCTCCGGCGACATGTCCCTCGATATGGATTTAGAAATGGACGAGCTTCAGCTACATGATCCTTACAAGACGTATCTGCCTCCTTCCGACGAGAATGTGCCGGTGAGTTTCTCCAGGGAGATCAAAGTCTCCTTCGAAGAACCGCCTCCTAATTCCGCCGACGAACCAGGCGATTCCGTTCGACGAAGGTACAAGGAGAGGCCGATCATGGCGGAATTCCTGAAACCACCACAACCACCGCAGACCGACCGCGGCGGCTCAGCTCAGAATGTTCATCCGGTAAACGGAGACGGCGAGGTTGTGAGGTGCACGTCAAACGCGTCTTTCGAGAGGAACCTTTCGTTGCAGAGGAAGTCGGGTTTGCTCAGGGCGAAAACCATCAAATCAAGACTGATCGACCCGCCAGATGAACCCGATCGGAGATCGGCCCGGATTCAGAGATCGGGGCAGATGCTGTCGGGTTTGCAGCCGGGGAATAATAAGAAAGGGGATGAGGAGGAGGAAGACCCATTTTTGGAAGAGGATCTTCCGGATGATATAAAGAAGACCAAATTCAGCATTTGGGTTCTACTAGAATGGTTGAGTCTGATTTTAATTGTGGCGGCATTGATAACCAATCTTTGTATCCCATTCTTGAGGAGAAAGAATCTGTGGAAGCTCAAGTTATGGAAATGGGAGGTGATGGTTTTGGTTCTGATTTGTGGCAGGTTAGTTTCGGACTGGGTGATTCGAATCGCGGTGTTCTTCATCGAAAGGAATTTCCTTCTGCGTAAGAGGGTGCTGTACTTTGTTTACGGGTTGAAGAAGGCAGTTCAAAATTGCCTCTGGTTGGGCCTGGTTTTAATTGCATGGCACTCTCTATTCGATCAAAAAGTGAAAAGGGAGACAAAAAACGAATTCCTAGAATATGTGACCAAGGTGTTGATCTGCTTCTTGGTGGGGACTCTGGTGTGGCTGCTGAAAACTCTGATGGTGAAGGTTCTGGCTTCCTCGTTCCATGTGCGCACCTACTTCGACAGGATACAGGAATCATTATTCAATCAGTACCTGATCGAAACACTGTCGGGGCCGCCATTGGTGGAGATTCAGAGGCAGGAGGAGGAGGAGGAGGAGAAGCTGGCGGAGGAGGTGATGAAGCTTCAGAATGCAGGAATCACCATACCGCCAGATCTGAGGGCGTCGGCGTTCTCTTCTCTGAATAATAAGAGCCCGAAGGTGAACAGGAGTGGGATGCTTCTCAAGAGTCCTCAGCTGAAAAGTGGCGAGTTTTCTCGACCACTTGCGAACAAGAAATCAGACGAAGGGATACCTATTGATTACTTACATAAGTTGAATCCCAGGAATGTGTCCGCATGGAATATGAAAAGGCTCATGAATATTGTGCGACACGGTGCTCTTTCCACGCTTGACGAGCAGATACAAGGTTTAGCCTATGAAGACGAACATATCACGCAAATCCGCAGTGAGAATGAGGCCAAAACAGCTGCCAAAAAGATATTTCAGAATGTCACCAGGAGCGGATCCAGGTTCATATACCTAGAGGACTTGTTGCTCTTTTTGAGAGAAGATGAAGCTGTCAAAACCTTTAGTCTATTCGAAGGAGCGCCTGATAGCGGCAAAATCAGCAAATCAGCCTTGAAGAACTGGGTGGTGAACGCTTTCAGAGAAAGGAGAGCACTTGCTTTGTCGTTGAATGACACGAAAACGGCAGTAAACAAACTCCATCGAATCCTCAATTTTCTAGTCGCCATTGTCATTCTCATTGTTTGGCTCTTAATACTGGAAATTGCCACCAGCAAATTTCTTGTCGTCGTCAGCTCCCAGCTCGTTTTGGCCGCATTTATATTTGGAAATACCTGCAAGACCATATTCGAAGCCATCATTTTCTTATTCGTCATGCACCCTTTTGACGTCGGAGATAGATGTGAAATTGATGGCATTCAGATGATTGTGGAAGAAATGAACATACTGACAACCATATTTCTGAGATACGACAATTTGAAGGTCATGATCCCTAACAGTGTTCTTGCTACCAAGGCCATATATAATTTCTACCGGAGTCCCGACATGGGTGAAGCTGCAGAGTTCTTAGTACATTTCGGTACCCCACCCGAAAAGATCACACTCATCATAAACAAAATAAGGAGTTACATCCAAAGCAAGAAGGAGTTCTGGGATCCCTCTCCAATGATAGTGTACAAGGACGTGGAGCAACTGAACATGATAAAGTTAGCAGTATGGCCAAGTCACAGAATGAACCACCAAGACATGGGCGAAAGGTTTGTGAGAAGATCCCTTCTGATTGAAGAGATGATCAAGATCTTCCGGGAGATCGACATCCAGTTCCGCCTGCTTCCCCTCGATGTTAGCGTTCGAAGCGCGCCCACCACCTCCGACCGCCTTCCTCCTAGTTGGGTCACCGCCGCATCATCACCTAATTAA 2874 0.4896 MDFALRKSFKSYGSLKRSTKLSAGDSADAGREDMPILFEQDPSSPEHNPPQPHATPSSSMTSPDRPTYCGDVIVKIDDSDSKSSKAASSSQGEAKVWRDLGCDFLREGDITPTKHGHSFDFQQPGPKLEDPPSRLIGKFLHRQKLSGDMSLDMDLEMDELQLHDPYKTYLPPSDENVPVSFSREIKVSFEEPPPNSADEPGDSVRRRYKERPIMAEFLKPPQPPQTDRGGSAQNVHPVNGDGEVVRCTSNASFERNLSLQRKSGLLRAKTIKSRLIDPPDEPDRRSARIQRSGQMLSGLQPGNNKKGDEEEEDPFLEEDLPDDIKKTKFSIWVLLEWLSLILIVAALITNLCIPFLRRKNLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVFFIERNFLLRKRVLYFVYGLKKAVQNCLWLGLVLIAWHSLFDQKVKRETKNEFLEYVTKVLICFLVGTLVWLLKTLMVKVLASSFHVRTYFDRIQESLFNQYLIETLSGPPLVEIQRQEEEEEEKLAEEVMKLQNAGITIPPDLRASAFSSLNNKSPKVNRSGMLLKSPQLKSGEFSRPLANKKSDEGIPIDYLHKLNPRNVSAWNMKRLMNIVRHGALSTLDEQIQGLAYEDEHITQIRSENEAKTAAKKIFQNVTRSGSRFIYLEDLLLFLREDEAVKTFSLFEGAPDSGKISKSALKNWVVNAFRERRALALSLNDTKTAVNKLHRILNFLVAIVILIVWLLILEIATSKFLVVVSSQLVLAAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGIQMIVEEMNILTTIFLRYDNLKVMIPNSVLATKAIYNFYRSPDMGEAAEFLVHFGTPPEKITLIINKIRSYIQSKKEFWDPSPMIVYKDVEQLNMIKLAVWPSHRMNHQDMGERFVRRSLLIEEMIKIFREIDIQFRLLPLDVSVRSAPTTSDRLPPSWVTAASSPN 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0027 957 MobiDBLite consensus disorder prediction 13 94 - -
Lele48g0027 957 Pfam Mechanosensitive ion channel 720 925 IPR006685 GO:0016020|GO:0055085
Lele48g0027 957 MobiDBLite consensus disorder prediction 270 317 - -
Lele48g0027 957 SUPERFAMILY Sm-like ribonucleoproteins 769 828 IPR010920 -
Lele48g0027 957 MobiDBLite consensus disorder prediction 273 288 - -
Lele48g0027 957 Gene3D - 779 828 IPR023408 -
Lele48g0027 957 Coils Coil 503 527 - -
Lele48g0027 957 MobiDBLite consensus disorder prediction 200 214 - -
Lele48g0027 957 MobiDBLite consensus disorder prediction 937 957 - -
Lele48g0027 957 MobiDBLite consensus disorder prediction 187 243 - -
Lele48g0027 957 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 46 949 IPR016688 -
Lele48g0027 957 PIRSF Memb_At2g17000 39 957 IPR016688 -
Lele48g0027 957 MobiDBLite consensus disorder prediction 108 133 - -
Lele48g0027 957 FunFam Predicted mechanosensitive ion channel 779 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0027 Lele-ChrLele48 903536 906869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0027 71 957 Mechanosensitive Ion Channel Family AT1G78610 54.130 0.0 885