Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0026 ATGCTTGAGGCATGTTCTAATACCAAAATACTGCCTCATTCTCGTCGTCCTGAAGCGTCTCCCTCCACTGTGTTGGACAATGATTCTTCTGTCACAGAGGTTATAGAACACAAACCATATGATCAAAAGGCTGATGTGTTTAGTTTTGGAGTTGTTTTATGGGAATTGCTCACTGGAAAGGGCCTACGACCTACGATCCCCAAGAACACACGTCCAAAATTTGTTGAGCTTCTTGAGAGGTGTTGGCAGCAAGATCCGACGACATTAAGACCTGATTTCTGTGAAATTATTGAGATCCTGCAGCTATTAGCCAACGAGCATGCTCTATTATTCTATAGACCCCTTTTCTCAATTGACCCAACAGAATACACCGAGGAGTTAACAGGATTTGTTTGCCCTATTTCATTTCAATTCTTTCTACTTGCTGTTCGGTTGGAATTCTTTGCTTTCAAGTTCAAGATCATTGTACATTAA 474 0.4114 MLEACSNTKILPHSRRPEASPSTVLDNDSSVTEVIEHKPYDQKADVFSFGVVLWELLTGKGLRPTIPKNTRPKFVELLERCWQQDPTTLRPDFCEIIEILQLLANEHALLFYRPLFSIDPTEYTEELTGFVCPISFQFFLLAVRLEFFAFKFKIIVH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0026 157 Pfam Protein tyrosine and serine/threonine kinase 32 58 IPR001245 GO:0004672|GO:0006468
Lele48g0026 157 Gene3D Transferase(Phosphotransferase) domain 1 15 112 - -
Lele48g0026 157 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 103 - -
Lele48g0026 157 SUPERFAMILY Protein kinase-like (PK-like) 33 123 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0026 Lele-ChrLele48 897932 900661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0026 33 106 MAP Kinase Kinase Kinase AT4G35780 58.696 3.40e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-3 Lele48g0026 PK_Tyr_Ser-Thr 3.7e-06 CL0016