Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele48g0009 ATGGAGGATACTCATAAGCCTTGTGTGGTCAACAGGAGAGACCTATTCATAAGATATACAGCACAGACAGTTCAGCACTGCCCTGAAGACACTAAAAAACTAAACCTGTTGGCTCCGAACTCCAGTTGCCAGGTGGACTGTGCAATAACAGATATTGAAGAATACGAGGATGTTGGTGACAATGGAGTTCCAGTGTTTGTGAAGCACACAGAAGCAATGCTGGACGAAATTGACAGATTAGAGGAAGTAGAAATGGAAGACGTGGAGGAGCCTGTTATGGACATCGACGTTTGTGATACGAAAGATCCACTAGCAGTTGTTGAATATATAGATGAGATCTACGAATTTTATAAGAAAACTGAGAATTCTGGCTGCGTCTCTCCAGACTACATGGCCGGGCAGTTTGACATCACTGAGAAGATGAGGGCTATCCTCATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTATGGAGGAGACATTGTACCTTACCGTAAATCTTATAGACAGGTTCTTGGAGCGTCAGGCGGTGATCAGAAAGAAGCTTCAGTTGGTCGGTGTAACAGCAATGCTAATAGCTTGCAAACAAGAGGAGGTTTCTGTCCCCACTGTTGAGGACTTTATCTTGATAACAGACAAGGCGTACAAAAGGGAAGAAATTCTAAATATGGAGAAGTTAATGACGAACACGCTACAATTCAACCTGTGTGTGCCTACTCCATATGTGTTCATGAGGAGATTTCTTAAAGCAGCCCAATCTGACAAAAAGCTGGAACTCTTGTCCTCCTTCATAATCGAGCTTTGCTTGGTGGAATACAAAATGCTCAAGTTTTCACCATCTTTGCTAGCTGCTGCAGCCATTTACACAGCTCAGTGTAGCCTGTACCAGTTTAAGCAATGGACGAAGACCAGTGAATGGTACACGAATTACTCGGAAGACCAGCTTCTAGAGTGCTCGAGAATGATGGTTACTTTCCATCAGAAGGCGGGGACTGGAAAACTTACAGGAGTCTGCAGGAAGTACAGCACGTGGAAGTATGGTTATGCCGCGAATATGAAACCAGCCCTGTTTTTTCTGGACTCTGATTGA 1095 0.4384 MEDTHKPCVVNRRDLFIRYTAQTVQHCPEDTKKLNLLAPNSSCQVDCAITDIEEYEDVGDNGVPVFVKHTEAMLDEIDRLEEVEMEDVEEPVMDIDVCDTKDPLAVVEYIDEIYEFYKKTENSGCVSPDYMAGQFDITEKMRAILIDWLIEVHYKFELMEETLYLTVNLIDRFLERQAVIRKKLQLVGVTAMLIACKQEEVSVPTVEDFILITDKAYKREEILNMEKLMTNTLQFNLCVPTPYVFMRRFLKAAQSDKKLELLSSFIIELCLVEYKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTNYSEDQLLECSRMMVTFHQKAGTGKLTGVCRKYSTWKYGYAANMKPALFFLDSD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele48g0009 364 FunFam G2/mitotic-specific cyclin-1 234 352 - -
Lele48g0009 364 Gene3D - 112 352 - -
Lele48g0009 364 CDD CYCLIN 141 229 IPR013763 -
Lele48g0009 364 FunFam G2/mitotic-specific cyclin 126 233 - -
Lele48g0009 364 Gene3D - 126 238 - -
Lele48g0009 364 CDD CYCLIN 239 325 IPR013763 -
Lele48g0009 364 ProSitePatterns Cyclins signature. 142 173 IPR006671 -
Lele48g0009 364 SUPERFAMILY Cyclin-like 101 238 IPR036915 -
Lele48g0009 364 SMART cyclin_7 244 326 IPR013763 -
Lele48g0009 364 SMART cyclin_7 147 231 IPR013763 -
Lele48g0009 364 SUPERFAMILY Cyclin-like 239 355 IPR036915 -
Lele48g0009 364 SMART Cyclin_C_2 240 357 IPR004367 -
Lele48g0009 364 PIRSF Cyclin_A_B_D_E 19 364 IPR039361 -
Lele48g0009 364 PANTHER CYCLINS 82 335 IPR039361 -
Lele48g0009 364 Pfam Cyclin, N-terminal domain 112 238 IPR006671 -
Lele48g0009 364 Pfam Cyclin, C-terminal domain 240 355 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele48g0009 Lele-ChrLele48 794839 796970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele48g0009 5 361 Core Cell Cycle Gene Families AT1G20610 60.656 6.99e-155 441