Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1295 ATGTTTTCGAGACTAATAGATCCTCACGAAGGGACATTTGGTCAAGAAAATATGCAGGGTGGATTGAACCACAGTCACCTTGGAGACCCATGTCTTGTCCTGACTGCTGATCCCAAACCTCGTCTTCGTTGGACTGCTGACCTTCACGAGCGATTTGTTGATGCTGTCACTCAGCTTGGAGGTGCCACCAAAGCTACACCAAAAGCAATCATGCGTACCATGAATATCAAGGGTTTGACTCTTTATCATTTAAAGAGTCATCTCCAGAAATACAGACTTGGCAAGCAATCAGGGAAAGATACTGGAGAGGGATGCAAAGATGGAATAGCTGCTTCGTATCTTTTAGAAAGCCCTGGTGACTCTGCTCCAAAGTTGCCAGCTTCTGATGCAAATGAAGGTCACGAAGTCAAGGAAGCATTAAGAGCACAAATGGAAGTGCAAAGTAAACTGCACTTGCTAGTCGAGGCGGAGAAGCACTTGCAGATACGCCAGGATGCAGAGAGGAAATATATGGCCATGCTTGAGAGAGCTTGTAAGATGTTAGCTGATCAATTTATTGGTGCTACAGTAATAGACACAGACAACCAAAAATTTCAAGGCATGGGAAATAAAACAGCGAAGTCTTCTATGCTTGATCCCCTCAGCTTTTGCTCCTTACCATCAACTGAGGCAACTGGAGTGCATGTTCCAGAAGCACAGCCTAGTTTCCAGCATCAGCGGGGTGACTGTTCAACCGAAAGCTGCTTGACATCACTTGAAAGCCTTGGAGGGTTGACTCTGGAAGGATCTCCTGGTGGAGCTAAAAAGAGGATGCTGAGCTTGGACTCAATGGTGGCGCCTTTGATCTGGAGTGAAGCCCATATGAGAACTCAAGGCGTTCATCTAGCCCAAGTTAATCCTCATGGAATAACTAGGTATGGGTTGTTGGGAAGGGAAGGTTGA 942 0.4607 MFSRLIDPHEGTFGQENMQGGLNHSHLGDPCLVLTADPKPRLRWTADLHERFVDAVTQLGGATKATPKAIMRTMNIKGLTLYHLKSHLQKYRLGKQSGKDTGEGCKDGIAASYLLESPGDSAPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERKYMAMLERACKMLADQFIGATVIDTDNQKFQGMGNKTAKSSMLDPLSFCSLPSTEATGVHVPEAQPSFQHQRGDCSTESCLTSLESLGGLTLEGSPGGAKKRMLSLDSMVAPLIWSEAHMRTQGVHLAQVNPHGITRYGLLGREG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1295 313 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Lele47g1295 313 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Lele47g1295 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Lele47g1295 313 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 254 IPR044848 GO:0003700
Lele47g1295 313 FunFam Myb family transcription factor 38 96 - -
Lele47g1295 313 Gene3D - 38 96 - -
Lele47g1295 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Lele47g1295 313 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1295 Lele-ChrLele47 18058174 18061691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1295 17 252 G2-like Transcription Factor Family AT3G24120 44.980 8.62e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele47g1295 Myb_DNA-binding 1.9e-06 CL0123