Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1294 ATGGGTCTTGATTCACCTACTTCACTCGCTCCGGGCTTCCGATTCCACCCCACCGACGAAGAACTCGTTCGTTACTACCTCACTCGCAAGTTCTCCGGCAAATCCTTTCGCTTCGACCCTATCGCCGTCATCGACATCTATAAATTCGAACCCTGGGACCTCCCATGTCAGTCGAAGCTGAAAAGCAGGGACTTGGAGTGGTACTTCTTTAGTGCGCTGGACAAGAAGTACGGAAATGGGTCGAGGACGAATCGGGCCACTGAGAAAGGATACTGGAAGACTACGGGCAAGGATCGCCCAGTCCGACATAGGTCTCGTACCGTAGGAATGAAGAAGACCCTTGTTTATCATAGTGGGCGAGCTCCGCGCGGTACCCGTACCAATTGGGTCATGCACGAATACAGATTAGCTGATGAAGAATTGGCAAAAGCAGGAATGCCGCAGGATGCGTTTGTGCTCTGTAGGATTTTCCAGAAGAGTGGTACTGGGCCAAAGAATGGGGAGCAGTATGGTGCCCCTTTTATAGAGGAGGAATGGGAAGATGATGATGTTGCTTTGGCTCCACTGCCCAGTGATGAGGCTGCAACTGATGAAATAATGGTCCATGATTATGCTTTTGTTGAAACCGATGACCTTGACCAGTACCTTGATATGGGTGTGGCATCCGAAGGTGCTGGTCATGCATTAAACTTCTATCATGGGGAGTGCAGCAGTTATCCTGAGCATTCCCAAGAATTGATTGAAGATCAAAAGCCCTTGGTTGGAACTGCTGAAACTTATGAGCCTCGAGATGACCCTTTATTGAATAGGCCGGAGCAACATCCTTCAGATATCAAACCAGTGAAAGATGGCATCAAGGCTGAAGCAAGTCATGAAGGATATTTCTTGAATCACAATAGCACATTTGATGAGACATACTTGGATGCCACTGATGGATCATTCCTGGAAACCGATGATCTGGTTAATCCTGCTGAGACAGATGCTGCTGATACTGATGTACTAGAACAGTATCTTACGTACTTTAATGACGGTGGTGATGATATTTCCCAGTATATCTCTTTCGATTCTCCTGAGTGGACAGGTAGTGAAAACCCTGATGCTGACGAAGGACCACCTTTAACCCAACTGAATGTTGGGGGAGAATCTAAGGATATGGCAAGTAAAATTGATGTGGAAGCCTATTCTAGCGAAGAAGCTTCTTTGAAGCAGCATGTAAAGGCATCAAAATTGGTGTCAGGAAATGCATACCCATTTATGAAGCAAGGCAGTCACTGTGTGGGCAGCACCCCTGCTCCCCCTGCATTTACTTCGGTGTTTCCTCCTAAAGAAATTGCTCTTCACCTTCATTCCACGGGTCAATGTTCCAATTCAGCTCATGTAACTGCAGGTATGATCAGAATAACAGACTTTACTGTGACAGGCAACAGGATGGACTGGATGCTGGGCAAAAATGGAGAGTTCAGTGTTGTAATCCCATATTGCTTTTGGCCTGATGTTAACTCTGTTGCTTTAGTGCCTATTTCTGGTTTACACTCTGGGAAGTCTGCATTTGTGGTGTCACACGGCTGGATTTACTTAGTCTTCTTTTCAGTGATGATTCTTTCACTGAGTTTCAAGATTGGAAGTTTCATGTATACCAGTAAATGA 1647 0.4602 MGLDSPTSLAPGFRFHPTDEELVRYYLTRKFSGKSFRFDPIAVIDIYKFEPWDLPCQSKLKSRDLEWYFFSALDKKYGNGSRTNRATEKGYWKTTGKDRPVRHRSRTVGMKKTLVYHSGRAPRGTRTNWVMHEYRLADEELAKAGMPQDAFVLCRIFQKSGTGPKNGEQYGAPFIEEEWEDDDVALAPLPSDEAATDEIMVHDYAFVETDDLDQYLDMGVASEGAGHALNFYHGECSSYPEHSQELIEDQKPLVGTAETYEPRDDPLLNRPEQHPSDIKPVKDGIKAEASHEGYFLNHNSTFDETYLDATDGSFLETDDLVNPAETDAADTDVLEQYLTYFNDGGDDISQYISFDSPEWTGSENPDADEGPPLTQLNVGGESKDMASKIDVEAYSSEEASLKQHVKASKLVSGNAYPFMKQGSHCVGSTPAPPAFTSVFPPKEIALHLHSTGQCSNSAHVTAGMIRITDFTVTGNRMDWMLGKNGEFSVVIPYCFWPDVNSVALVPISGLHSGKSAFVVSHGWIYLVFFSVMILSLSFKIGSFMYTSK 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1294 548 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Lele47g1294 548 MobiDBLite consensus disorder prediction 263 278 - -
Lele47g1294 548 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lele47g1294 548 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 227 - -
Lele47g1294 548 MobiDBLite consensus disorder prediction 259 278 - -
Lele47g1294 548 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Lele47g1294 548 FunFam Nac domain-containing protein 86 18 162 - -
Lele47g1294 548 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1294 Lele-ChrLele47 18051604 18054712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1294 1 540 NAC Transcription Factor Family AT5G04410 44.444 1.13e-138 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele47g1294 NAM 2.8e-36 No_clan