Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1281 ATGAAAGTACATGTATCCTCCAAGCAACAAGATGCACTGGGGACTCTTACTCCGTTGTGCATCCAACAAAACCCAACAAGCTCTTTCCAGCTATGCATTGCTCCATCGACGGACATGGCTAGAAAATGGGGTTGGTTTTCTGCCGTGAAGAAAGCTATCAGTATTGGTGATTCCCAGAAAGATCAGAATCAGAAGAACCATAAGTTGAACACAACATGGTCTGCCGAACCCGCAGATGTGCAACCAGCTCTCTCGTCCAAAGAAGAACCAACATTTGATGTTGCTCCTCCTCTTCCATCTATTGGCACTGATCAGAAAGAGATAAGTGAAGAGATCAATGAAAAGATCAAGCATGCTTATTCGGTGGACGATGCCACTGCTGCTGTTGCAGCAGATGCACAGGATGCTGCGACTGCTGATGCACATCAGGCTGCTGAAGAGGTTGTTCATCTAACAAGTCCGCCTCATTACTTGTTGGGGAAGACAAAGGAAGAAATAGCTGCTATCAAAATTCAGACGGCATTTCGAGGGTATTTGGCAAGAAGAACATTGCATGCATTGAGAGGATTGAAGAGGTTGAAAACATTGACACAAGAGCACTCTGTGAAACAGCAAGCAGAAGCCTCCTTACGATGCATGAAGACTCTTGCAAAGGTTGGAGAAAATTGGGATGATAGCACGAAATCTAAGGAAGAAATTGAAGCGAGGCTGTTGGACAGAAAAGAAGCAGCTATGAGAAGAGAGAAAGCTCGGGCGTATTCATCCATGCATCAGCAGCAGCCGTCAAAGAGGGGAGATAGGACGTTGACGGATATCAATAGCATGAATCCAGATTGGAGCTGGAGTTGGGGGGAGCGATGGAGGGGATCACGGCCATGGGATGAGAAGCGGGGCGGTTCAGTGGCTGATTGCGGCCATGCCCAAAAACCAAGCCGCCCTCCTGCCCAACATTCTGCCGCCGTGTCGGGTGGAAAAGCAAGGCCACAGCAGCTCCATCGGAGGCATAGCAGTGCGGGATTGTCAGTAAGAGAGGATGACGACGACGTGGGCAGCTCATCAGGGAAGGCCAAGTATTCAGCTGCACCTTCAAAATTATTTGCTCTCTCTCCAAACAGGACTTCTCCATCTGCTTCCAAGAGGCATTCTTGTCCCCCTCAGATTCTTTTGAATCCCCAGATGCCTTGTTCTCCTTCCCTTCATAATCAATCTCAACTTTAA 1218 0.4819 MKVHVSSKQQDALGTLTPLCIQQNPTSSFQLCIAPSTDMARKWGWFSAVKKAISIGDSQKDQNQKNHKLNTTWSAEPADVQPALSSKEEPTFDVAPPLPSIGTDQKEISEEINEKIKHAYSVDDATAAVAADAQDAATADAHQAAEEVVHLTSPPHYLLGKTKEEIAAIKIQTAFRGYLARRTLHALRGLKRLKTLTQEHSVKQQAEASLRCMKTLAKVGENWDDSTKSKEEIEARLLDRKEAAMRREKARAYSSMHQQQPSKRGDRTLTDINSMNPDWSWSWGERWRGSRPWDEKRGGSVADCGHAQKPSRPPAQHSAAVSGGKARPQQLHRRHSSAGLSVREDDDDVGSSSGKAKYSAAPSKLFALSPNRTSPSASKRHSCPPQILLNPQMPCSPSLHNQSQL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1281 405 MobiDBLite consensus disorder prediction 290 405 - -
Lele47g1281 405 MobiDBLite consensus disorder prediction 254 272 - -
Lele47g1281 405 ProSiteProfiles IQ motif profile. 164 192 IPR000048 GO:0005515
Lele47g1281 405 MobiDBLite consensus disorder prediction 366 385 - -
Lele47g1281 405 PANTHER IQ-DOMAIN 5-RELATED 39 385 - -
Lele47g1281 405 SMART iq_5 163 185 IPR000048 GO:0005515
Lele47g1281 405 Gene3D iswi atpase 159 188 - -
Lele47g1281 405 Pfam IQ calmodulin-binding motif 167 184 IPR000048 GO:0005515
Lele47g1281 405 MobiDBLite consensus disorder prediction 337 352 - -
Lele47g1281 405 MobiDBLite consensus disorder prediction 245 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1281 Lele-ChrLele47 17986269 17988850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1281 39 294 IQD Protein Family AT5G03040 36.667 2.68e-43 155