Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1268 ATGACAGCAACCCAGTTTTCTGAGAGACCAAGCATGGAGATGGAATCTTGTGTTCCACCGGGGTTTAGATTTCGTCCCACAGAGGAAGAACTTGTGGGCTACTACCTCAAGAGGAAGATAAACTCGTTGAAAATCGATCTAGATGTTATTGCAGAGATCGATCTCTACAAGATTGAACCATGGGACATTCAAGATAAATGCAAGATGGGGTACGAAGAAGAGAAGGAGTGGTATTTCTTCAGTCACAAGGACAAGAAGTACCCGACAGGGACGAGAACAAACAGAGCGACAGCAGCAGGTTTCTGGAAAGCAACGGGGAGGGACAAGGCAGTGATGACCAAGAAGAACAGAATCATAGGTATGAGGAAGACCCTCGTCTTCTACAAGGGACGTGCCCCTTATGGCTCCAAGACCGATTGGATTATGCATGAATTTCGCCTCCAAACCTCCCAACACTCCCCTCCTCAGGAAGAAGGATGGGTGGTGTGCCGAGCATTTAAGAAACCTAGTCCTACACAGCACAGACCAAGTTTCGATTGTTGGAGTAGCCAAGCACAGTTTTTATGCAGGGACCAGATAAGCAATACTACAAGACCTCAATCTCTTTCATTTACCAACGGAACCCTAAATCAGGTGCTTTATCCAGCTAATGAAGGAACAAGCTTTAGCCATGCCTTCATTTTGAATCATCATCACCAACAGTTTCTGTCAAACGATGCCGTTTTGGACGACAACAACTACAGCAGCCAGCTTGTTGAGCCCATTCCACATCTAGATAGCCCCACGGCTTCTTTATCAGCTAGAGCAGTGAAACAAAATGGCTTAACAAATGAAAACAGTTACAGTCAACAAAGGACCAATAATAACAACAACAACGTTAACGATGGCCAAGGCATTGATTGGAAGAGTTTGGACAACTTGTTCAATACACAGTTCGCAGATGATACTGCCGCTGCTGCTTATTTTTCTCATCCAAACATGCCCTTGATGCCACAAACTAGTCATGAACTACAAGTATTACAACCACAAAATCACCAAGCTAGCCATGTTCTGGGATGCTTTCCTGATTCATAA 1074 0.446 MTATQFSERPSMEMESCVPPGFRFRPTEEELVGYYLKRKINSLKIDLDVIAEIDLYKIEPWDIQDKCKMGYEEEKEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMTKKNRIIGMRKTLVFYKGRAPYGSKTDWIMHEFRLQTSQHSPPQEEGWVVCRAFKKPSPTQHRPSFDCWSSQAQFLCRDQISNTTRPQSLSFTNGTLNQVLYPANEGTSFSHAFILNHHHQQFLSNDAVLDDNNYSSQLVEPIPHLDSPTASLSARAVKQNGLTNENSYSQQRTNNNNNNVNDGQGIDWKSLDNLFNTQFADDTAAAAYFSHPNMPLMPQTSHELQVLQPQNHQASHVLGCFPDS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1268 357 SUPERFAMILY NAC domain 12 168 IPR036093 GO:0003677|GO:0006355
Lele47g1268 357 Gene3D NAC domain 27 171 IPR036093 GO:0003677|GO:0006355
Lele47g1268 357 Pfam No apical meristem (NAM) protein 19 147 IPR003441 GO:0003677|GO:0006355
Lele47g1268 357 FunFam Nac domain-containing protein 86 27 171 - -
Lele47g1268 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 279 - -
Lele47g1268 357 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Lele47g1268 357 MobiDBLite consensus disorder prediction 277 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1268 Lele-ChrLele47 17898495 17901507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1268 14 357 NAC Transcription Factor Family AT1G71930 50.423 6.92e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele47g1268 NAM 2.3e-36 No_clan