Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1265 ATGTCATCATTTGAGTGCATATATATGTGGGCATTCACCAAGTGTTGCCTTACCAAGCCATATCATATTATTTGCTGTGCTTCGAACAAGAGAAAGAAAGCCATCATGGGTTCTACAGAGAAGTACGGCCACAACAAGCTTGCCACTAAGGAAGACGACGATGAAGCATGCGTCTATGCCATGCTCTTATCGACCTTTCAGGTTTTCCCCGCGATTCTGAACGCCGCCATAGAGCTTAAGGTGTTGGACAAGATCTCAGAGAAATCAGCCGCAGCTTCCGGCGATGGTTTCTTGTCAGTTTCAGAGATTGCTTCTGAACTTCCCACACAGCACTCAGAGTTACATGACAGGGTCGACCGAATGCTGCGAGTGCTGGCGTCTTTCAAGGTTCTTGATTGGACCACTCGCACCAACCATGATGGTCAGGTGGAGAGGCTTTATAAACTGTCTCTTGCCGGCTCTTATTTTCTTCAGTCCCAAACTGAGAGCCTCGCTTCTTTCTCTAACCTCCAGTGCCATCCGGCTACTGCTAAGGTTTGGCTGAACATAAAGGAAGCAATACTGGATGGAGGAGTGGACCTGTTCAATAAAGTACACGGCATAACAATGTGGAAGTACATGGAGAAGGAGGACACAAAGCTGAACCAGACATTTAACAAGGCGATGGCAGGCATGTCAGCAATTCATATGAGGAAATATCTGGAAGCCTATGATGGCTTTCAAGGAGTTTCAACCTTAGTTGATGTCGGAGGAGGCACTGGTCAAAGCCTCCAAGCCATAATCTCCAAGCACCCTCACATCAAGGGCATTAACTTTGATCTTCCCCAAGTCATTCAACATGCTCCACCCCATCCACGAATCGAGCATGTTGGAGGAGACATGTATGCGAGTGTTCCCAAGGGTGATGCTATTATGGTCAAGGCTACGTGTCACAATTGGTCGGATGAAAAATGTGTGGCGCTGTTGAAGAACTGTCACAAAGCGCTTCCTGAAAATGGCAAGGTGATAATTCTGGACATGATATTGCCTGAGGAACCAGATTCGAGTGATGCTACTAAGTATGCGTCCATTGTAGACAACTCAATGTTCATTCAAGCTGGTGGCAGAGAAAGAACTGAAAAACAGTTCGAGAAGCTCTGCAAAAACTCTGGATTCTCCAGCTTCCGTGTTGCCGCTCGTGCTCTCTCCGTTTTTGGCGTCGTCGAGTTTTACAAATGA 1218 0.4688 MSSFECIYMWAFTKCCLTKPYHIICCASNKRKKAIMGSTEKYGHNKLATKEDDDEACVYAMLLSTFQVFPAILNAAIELKVLDKISEKSAAASGDGFLSVSEIASELPTQHSELHDRVDRMLRVLASFKVLDWTTRTNHDGQVERLYKLSLAGSYFLQSQTESLASFSNLQCHPATAKVWLNIKEAILDGGVDLFNKVHGITMWKYMEKEDTKLNQTFNKAMAGMSAIHMRKYLEAYDGFQGVSTLVDVGGGTGQSLQAIISKHPHIKGINFDLPQVIQHAPPHPRIEHVGGDMYASVPKGDAIMVKATCHNWSDEKCVALLKNCHKALPENGKVIILDMILPEEPDSSDATKYASIVDNSMFIQAGGRERTEKQFEKLCKNSGFSSFRVAARALSVFGVVEFYK 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1265 405 FunFam Caffeic acid O-methyltransferase 158 405 - -
Lele47g1265 405 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 163 397 IPR029063 -
Lele47g1265 405 CDD AdoMet_MTases 245 337 - -
Lele47g1265 405 Gene3D - 36 156 IPR036388 -
Lele47g1265 405 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 61 405 IPR016461 GO:0008168
Lele47g1265 405 Gene3D Vaccinia Virus protein VP39 157 405 IPR029063 -
Lele47g1265 405 PIRSF O-mtase 38 405 IPR016461 GO:0008168
Lele47g1265 405 Pfam Dimerisation domain 72 126 IPR012967 GO:0046983
Lele47g1265 405 SUPERFAMILY "Winged helix" DNA-binding domain 52 159 IPR036390 -
Lele47g1265 405 PANTHER O-METHYLTRANSFERASE 61 403 IPR016461 GO:0008168
Lele47g1265 405 Pfam O-methyltransferase domain 180 386 IPR001077 GO:0008171
Lele47g1265 405 FunFam Caffeic acid 3-O-methyltransferase 38 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1265 Lele-ChrLele47 17876969 17879112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1265 53 405 Monolignol Biosynthesis Gene Families AT5G54160 45.915 1.96e-105 314