Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1263 ATGGCTAGGTATGGGTGCATATCGCCTTTCCTCTTCGTGTCTCTCTGCTTTTGGTTCTGCCCAATGGTGCTGTGTGAGCTATCCCAGAACCAAACCAACACCATGACCACACTCTCCCAGCTTCTTGCTGGAACTGGATTAAGTGGTTCATGGAACATTACCACAAACCCAAATCCATGTAAATGGCAGGGTGTTGACTGCGATAACACCAATTCCTCTATAATCAAATTTCGGCTATCTGGATACTCCATCTCTTCTTCCGAATTCCTCACTCTTCTTTGCCAAATTGAAAGTTTGCAGCATCTTGATCTTTCTGGTAATTTTCTTAGCACAATTCCAGACAAATTCATCACTGATTGTGGCAAGGTTGAGGGATTAAAGTTGCTCAATTACAGTAGAAACAACATAAGGGGTCCCTTGCCTACCTTTCGTGGATTTCATGGGTTAGAATCCCTGGATATCTCTTTCAATCACTTTTCAGGGAAAATTGATTCGGAGTTAGCTGGATTAGCTAGCCTCAAGAGCTTAAATCTTAGTGTCAATTCTTTCAGTGGGCCCCTTCCTACAAAACTGGGGAATTCCTCGGCTTTGGAGCAGCTTGTGCTAAGTGATAATCAATTTGAAGGAACAATCCCTGCTGAAATCCTGAGTTACACAAATTTGACTTTGCTTAATCTTCAACAAAATAAGCTTTCAGGGTCTATTCCTAGCAACATAGGAGATCTATCCAAATTGGAAACTCTAATTCTGTCCTCTAATCATCACCTTGGAGGGGAAGTCCCAAGTGCACTCTCGAACATCAAAACCCTCGTCCGTTTTGCAGCCAATGAAAACTACTTTAATGGCTCTGTTCCCAGCGGAATTACAATATTTCTCGGTAACTTGGATCTCAGTTATAATAATTTGTCCGGCCCGATTCCAGCAGACCTTTTTTCACACTCAAATCTGGTGTCCGTGGATTTGTCCTATAACTCGTTATCTGGGCCATTACCTGCAGACATATCTTCTAGCATTATCAGGTTGAGATTAGGGGGGAACTCTCTAAATGGGACGATACCATCAAAACCATTTGCGACGGCTCTGAAGATGATGTATTTCGAACTTGAAGCCAATAACTTGACAGGCCAAATACCCGTTGAGGTGGGTTCTCGTCAGAGTTTGGCCTTGTTGAACTTGGCTCACAATCATCTATATGGGGAATTGCCTGCAGAGCTCGGTAAGCTTATCAATCTTCAAGTCTTGCAGCTTCAAGGGAATAAGCTTTCTGGACAAATACCAACTGAAGTGTCTCATCTACAGAAGTTGTCAACGCTGAATTTGAGCGACAATTCTCTGAATGGAATCATTCCACCAGAAATTTTCAATTTGGTAAAGCTTAATAAGCTTTACTTACAGCAAAACAATCTCATAGGCGCTATTCCCACATCTATAAGCAGCATGGATTCTCTTATTGAACTTCAACTTGGAGAAAACCAGCTGCGTGGTTTGATTCCAAAAATGCCATCGAATCTTCAGATTGCCTTGAATCTCAGCAGAAATCTCTTTATGGGGCCTATTCCTAGCACTCTTGCTGGGTTGAGTAAACTGGAAATCTTGGATCTTTCACATAACAAATTTAACGGTTCTATTCCTGATTTTCTTACCAGAATGCCAGCTTTGACACAGTTGGAACTTTCTAATAATGAGCTGGATGGTATCATTCCCGACTTTAGTTCTCATGTTAAGGTTGATTGGGATGGAAATAATAATCTCGTAAACAAAACTGCAACTTCCAACACTTACCCAGGATCTTCAAAGGGAAATCCTGTTGTTGTGGCAGTTCTTGTTGCAATTGCAGCTGCAGTTTTTCTTGTTGGCCTGGTCACTGTGCTTGCTGTATTAATCTCACGACGCTTATACAGGGTAAAGGACGAACACTTGCAACCACCTGAAGACAATCAACCCCCTCAGGTCATCCAAGGTAACTTATTAACTCCAAATGGAATTCACAGATCCAACATTGATTTCTCTAAGGCCATGAAAGATGTTGCTGAAACATCAAACGTTACTCTGAAAACAAGGTTTTCAACTTATTACAAGACTATTATGCCATCTGGATCAATCTACTTTGTCAAGAAGCTTAACTGGAGTGAGAAGCTATTCCCACTGGGCAGTCATGATAAATTTGGCAGAGAGCTAGAGGTCTTGGCAAAACTGAACAATTCAAATGTCATGACTCCTTTGGCTTATGTTCTGTCCACTGACAACGCTTATATACTGTATGAATTTATCTCAAATGGCTCCCTTTATGACGCTCTTCACGGAAGCATGGGAAGCTCTTTAGATTGGGCTAGCAGATATAGTATAGCTATTGGGGCGGCTCAAGGTCTTTCTTTTCTTCATGGATTTACCTCAGGTCCAATTCTTCTCCTTGACCTATCAAGTAAAAGTATAATGCTGAAGTCCCTCAAGGAGCCTCTAGTTGGAGATATTGAACTCTACAAGGTGATTGATCCTTCAAAGAGCACAGGAAGTTTTTCTGCAGTTGCTGGTTCCGTTGGCTATATACCTCCAGAGTATGCATACACAATGAGAGTGACGATGGCGGGGAATGTGTACAGCTTTGGGGTAATCCTGCTTGAATTGTTAACGGGGAAGCCGTCAGTGAGTGATGGAACAGAATTGGTGAAGTGGGTGATGCGCAACTCAACGAAGCAAGAGCACATTCTGGATTTTAATGTCAGTAAAACATCTCAGGCTGTCAAAGCGCAGATGCTTGCAATCCTTCGGATAGCTGTTGCCTGTGTCAGTGCATCCCCTGAAGCAAGACCAAAGATGAAGAGTGTGCTCCGGATGCTCCTGAATGCACGTTAA 2853 0.4234 MARYGCISPFLFVSLCFWFCPMVLCELSQNQTNTMTTLSQLLAGTGLSGSWNITTNPNPCKWQGVDCDNTNSSIIKFRLSGYSISSSEFLTLLCQIESLQHLDLSGNFLSTIPDKFITDCGKVEGLKLLNYSRNNIRGPLPTFRGFHGLESLDISFNHFSGKIDSELAGLASLKSLNLSVNSFSGPLPTKLGNSSALEQLVLSDNQFEGTIPAEILSYTNLTLLNLQQNKLSGSIPSNIGDLSKLETLILSSNHHLGGEVPSALSNIKTLVRFAANENYFNGSVPSGITIFLGNLDLSYNNLSGPIPADLFSHSNLVSVDLSYNSLSGPLPADISSSIIRLRLGGNSLNGTIPSKPFATALKMMYFELEANNLTGQIPVEVGSRQSLALLNLAHNHLYGELPAELGKLINLQVLQLQGNKLSGQIPTEVSHLQKLSTLNLSDNSLNGIIPPEIFNLVKLNKLYLQQNNLIGAIPTSISSMDSLIELQLGENQLRGLIPKMPSNLQIALNLSRNLFMGPIPSTLAGLSKLEILDLSHNKFNGSIPDFLTRMPALTQLELSNNELDGIIPDFSSHVKVDWDGNNNLVNKTATSNTYPGSSKGNPVVVAVLVAIAAAVFLVGLVTVLAVLISRRLYRVKDEHLQPPEDNQPPQVIQGNLLTPNGIHRSNIDFSKAMKDVAETSNVTLKTRFSTYYKTIMPSGSIYFVKKLNWSEKLFPLGSHDKFGRELEVLAKLNNSNVMTPLAYVLSTDNAYILYEFISNGSLYDALHGSMGSSLDWASRYSIAIGAAQGLSFLHGFTSGPILLLDLSSKSIMLKSLKEPLVGDIELYKVIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKPSVSDGTELVKWVMRNSTKQEHILDFNVSKTSQAVKAQMLAILRIAVACVSASPEARPKMKSVLRMLLNAR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1263 950 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 330 - -
Lele47g1263 950 ProSiteProfiles Leucine-rich repeat profile. 98 119 IPR001611 GO:0005515
Lele47g1263 950 SMART LRR_typ_2 408 431 IPR003591 -
Lele47g1263 950 SMART LRR_typ_2 218 242 IPR003591 -
Lele47g1263 950 SMART LRR_typ_2 480 503 IPR003591 -
Lele47g1263 950 SMART LRR_typ_2 432 456 IPR003591 -
Lele47g1263 950 SMART LRR_typ_2 526 549 IPR003591 -
Lele47g1263 950 SMART LRR_typ_2 170 194 IPR003591 -
Lele47g1263 950 SMART LRR_typ_2 550 573 IPR003591 -
Lele47g1263 950 SMART LRR_typ_2 96 119 IPR003591 -
Lele47g1263 950 Gene3D Phosphorylase Kinase; domain 1 663 756 - -
Lele47g1263 950 SUPERFAMILY L domain-like 336 573 - -
Lele47g1263 950 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 332 595 - -
Lele47g1263 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 757 950 - -
Lele47g1263 950 Gene3D Transferase(Phosphotransferase) domain 1 757 950 - -
Lele47g1263 950 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Lele47g1263 950 Pfam Leucine rich repeat 410 469 IPR001611 GO:0005515
Lele47g1263 950 Pfam Leucine rich repeat 98 159 IPR001611 GO:0005515
Lele47g1263 950 Pfam Leucine rich repeat 508 563 IPR001611 GO:0005515
Lele47g1263 950 Gene3D Ribonuclease Inhibitor 188 290 IPR032675 -
Lele47g1263 950 PANTHER LEUCINE RICH REPEAT KINASE 2 72 213 - -
Lele47g1263 950 SUPERFAMILY L domain-like 50 329 - -
Lele47g1263 950 Gene3D Ribonuclease Inhibitor 505 593 IPR032675 -
Lele47g1263 950 Gene3D Ribonuclease Inhibitor 383 504 IPR032675 -
Lele47g1263 950 Gene3D Ribonuclease Inhibitor 291 382 IPR032675 -
Lele47g1263 950 ProSiteProfiles Protein kinase domain profile. 677 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1263 950 PRINTS Leucine-rich repeat signature 435 448 - -
Lele47g1263 950 PRINTS Leucine-rich repeat signature 526 539 - -
Lele47g1263 950 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 645 756 - -
Lele47g1263 950 SUPERFAMILY Protein kinase-like (PK-like) 688 946 IPR011009 -
Lele47g1263 950 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 29 190 - -
Lele47g1263 950 Pfam Protein tyrosine and serine/threonine kinase 719 946 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1263 Lele-ChrLele47 17869572 17872724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1263 149 950 Receptor kinase-like Gene Family AT2G41820 39.042 3.59e-153 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele47g1263 PK_Tyr_Ser-Thr 3.8e-22 CL0016