Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1259 ATGGATCCCTCCAAGCTTCCCCCTCCTCCTCCTCCCTCCAACACTAGCACTAAGCCTTCCTCTCTTCAGCTCGAGCTCGCTACCTCCATTGAGCCAAGTCCTTTACGTAAGATCGTTGCCGTCGCCTCCATCGCCTCCGGCATTCAGTTCGGCTGGGCTCTCCAGCTTTCCCTCCTGACCCCTTACGTCGAACTCCTCGGAATCCCCCACACCTGGGCCGCCTTCATCTGGCTCTGCGGCCCCATCTCCGGCATGATCGTCCAACCCATAGTTGGATACCACAGTGACCGCTGCACTTCCCAATTCGGACGCCGACGTCCCTTCATTGCCGCCGGCGCTGCCTTCGTCGCCATCGCTGTCTTCCTCATCGGCTACGCTGCCGATATGGGCCACATGTTCGGTGACTCCTTGGAGAAGAAAACCAGGCCTCGCGCCATCGCCATATTCGTCGTCGGGTTCTGGATCCTCGACGTCGCCAACAACATGCTCCAGGGGCCGTGCCGAGCACTTCTTGCAGACCTTGCCGCCGGCGACCAACGTAAGACGCGGACTGCGAATTCGTTCTTCTCGTTCTTCATGGCCGTGGGAAACGTCCTCGGGTATGCCGCGGGGTCGTTCAGCCGCCTCCACAAGATGTTCCCGTTTACGATGACAAAAGCCTGCGACGTGTACTGCGCGAACCTGAAGAGCTGCTTCTTCCTCTCCATCGCACTTCTGGCGACTGTCTCCGCCATTGCCCTCACGTACGTGAAGGAGAAAAAGGTATCATCGTCGTCGGGTGAGAAAACAACGAAAGAAGTCGGTGGTACGGCGGTAAACGAAGAGGAATCAGAGGAAGGATCAAGATCGTCACGAGCAATGCCTTGCTTCGGGGAAATATGGGGTGCTCTGCGAGTGATGGAGAAGCCGATGTGGATCCTGCTCTTGGTGACGTGTCTCAACTGGATTGCTTGGTTCCCCTTCTTGCTGTTCGACACTGATTGGATGGGGAAGGAGGTGTATGGCGGGAAGGTGGGAGGAGAAGGGGGAGAAGGGAGGGTGTACGATATGGGGGTGCGTGCGGGTGCATTGGGCCTCATGCTCAACTCCGTGGTGCTGGGTTTCACGTCCTTGAGCATCGAGTTTCTGGCGCGTGGGGTTGGGGGCGTCAAGAGGCTCTGGGGAATTGTGAACTTCCTGCTCGCCACCTGTTTAGCGTTCACCGTGCTGATTACAAAAATCGCTGACCACTCACGTCAGTACACCGTTGGCCACAGCGGCGACTTGGAGCCTCTGCCGCCGTCCTCCGGGGTGAAAGGTGGCGCGTTGGCTCTTTTCTCAGTGCTGGGTGTCCCCCTGGCGGTTACTTTCAGTATTCCTTTTGCTCTTGCATCTATATTCTCCAACAGTTCAGGGGCAGGCCAAGGGTTATCTCTGGGAGTTCTCAATCTTTCAATCGTCATTCCTCAGATGGTGATCTCTGTGGCAAGTGGACCATGGGATGCCTTGTTTGGCGGCGGAAACTTGCCAGCATTTGTGGTGGGCGCGGTGGCAGCGGCTATAAGTGGCTTATTATCAATATTCTTACTGCCATCCCCACCGACGGATATGGCCAGTACTGCGGTGGCGGCCGGAGGCTTCCATTAA 1626 0.5713 MDPSKLPPPPPPSNTSTKPSSLQLELATSIEPSPLRKIVAVASIASGIQFGWALQLSLLTPYVELLGIPHTWAAFIWLCGPISGMIVQPIVGYHSDRCTSQFGRRRPFIAAGAAFVAIAVFLIGYAADMGHMFGDSLEKKTRPRAIAIFVVGFWILDVANNMLQGPCRALLADLAAGDQRKTRTANSFFSFFMAVGNVLGYAAGSFSRLHKMFPFTMTKACDVYCANLKSCFFLSIALLATVSAIALTYVKEKKVSSSSGEKTTKEVGGTAVNEEESEEGSRSSRAMPCFGEIWGALRVMEKPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGKVGGEGGEGRVYDMGVRAGALGLMLNSVVLGFTSLSIEFLARGVGGVKRLWGIVNFLLATCLAFTVLITKIADHSRQYTVGHSGDLEPLPPSSGVKGGALALFSVLGVPLAVTFSIPFALASIFSNSSGAGQGLSLGVLNLSIVIPQMVISVASGPWDALFGGGNLPAFVVGAVAAAISGLLSIFLLPSPPTDMASTAVAAGGFH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1259 541 TIGRFAM GPH_sucrose: sucrose/H+ symporter 34 528 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lele47g1259 541 Pfam MFS/sugar transport protein 51 266 - -
Lele47g1259 541 SUPERFAMILY MFS general substrate transporter 38 526 IPR036259 -
Lele47g1259 541 MobiDBLite consensus disorder prediction 1 21 - -
Lele47g1259 541 PANTHER SUGAR TRANSPORTER 34 522 - -
Lele47g1259 541 MobiDBLite consensus disorder prediction 1 16 - -
Lele47g1259 541 Gene3D MFS general substrate transporter like domains 29 532 IPR036259 -
Lele47g1259 541 CDD MFS_SLC45_SUC 38 521 - -
Lele47g1259 541 FunFam Sucrose transport protein 32 523 - -
Lele47g1259 541 MobiDBLite consensus disorder prediction 260 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1259 Lele-ChrLele47 17850040 17852677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1259 31 541 Sucrose Transporter Gene Family AT1G71890 65.558 0.0 686