Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1256 ATGATGGGGAAGCAATATTATTATTCAGCATGCCTTTTGCTTCTTCTCATGGCATTATCACTAATCTTTGCAGTGTCATCGGCGGAAGAAATTGATAACGTCTCATTATTGCCAAAGAGGCACGTGAGGATCACAAACGACCTGGGGAAGGGTCTCGTTTTGAAGATTCACTGCAAGTCTAAGGACGATGATCTGGGAGTACACAACCTGTCGTTTCAGGGCACATATTCATGGAAGTTCAAGACCAACGCGTTTCTGAAGATAACGTTGTTCTATTGCTACATGTCGTGGGGCGACAATGTGAAGGGAAGCTTTGATGTGTACAGAGCAACCAGAGACGATCTCAAGTGTACGGACTGCAAATGGAGTATCAGAACTGATGGTGCCTATTGGTTTGATGCTGAGACTAATCGCTGGAATCTCATGTATCGATGGCCTAAACCCTAG 447 0.4474 MMGKQYYYSACLLLLLMALSLIFAVSSAEEIDNVSLLPKRHVRITNDLGKGLVLKIHCKSKDDDLGVHNLSFQGTYSWKFKTNAFLKITLFYCYMSWGDNVKGSFDVYRATRDDLKCTDCKWSIRTDGAYWFDAETNRWNLMYRWPKP 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1256 148 Pfam Plant self-incompatibility protein S1 41 145 IPR010264 -
Lele47g1256 148 PANTHER - 37 133 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1256 Lele-ChrLele47 17814396 17814842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1256 38 145 Carbohydrate Esterase AT3G16970 39.286 2.23e-20 79.7