Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1240 ATGGATATCAGTAATGGTTCTATATCAAGTGATCAGCACCGCAAACCTCATGAATCAGTTTCAAAAAGTGCAGATTCATTATCTTTTTCTTCATTGCAAACTTCTCCAAAGTCACCGAGACCCTGTGGCTCTCCAAGGTCCCCCAGGTTCCAAGGCAAGGGCAGCAAGCAAAGTTCAAATCATGACAAGCACCCACAATCTCCAAGAGATGCATGTCCCAAGAAAGATTCATCCCCCGTTACTTCATTGAAAATTTCTCCTACGTCGCCAACATCCCCCACTTCTCCAAGGTCTCCAAGGTTACCTGGCCATAGTCCAAAGAATGAAAGGCATTCACGTTCGCCAAGAGATGGACGACCAAAGAAAGGAGGTTGTGGAGGGAAAGGCACGTGGGGAGGATTGCTTGATACTGAAGACATGAACATTGTTGACCCTCATGATCCAAACTATGACAGCACTGAGGAAAAGGAACCTTCAAATGAAAAGAATAAAAAGAGAGGGGAGTTAGATGAGTACAAGAAGAAAGCTACAATAATAGTGGAGGAATATTTTACAACTGATGATATTGTTGCTGTAAAAAATGAACTGAAAGAACTTGGAACACCATACTTTAGCTACTATTTTGTCAAAAAGCTTGTGTCAATGTCAATGGACAGACATGACAAAGAAAAAGAAATGTCTGCTGTTCTGCTATCTGCACTTTACGCTGACACAGTTGATCCTTCTCAAGTTTACAAGGGCTTCAGTAAACTAGTTGAATCTGCAGATGACCTGATTGTAGACATACCAGACGCAGTCGATGTTCTAGCGCTTTTCTTGGCTCGAGCCGTGGTTGATGACATACTTCCTCCTGCGTTTTTGAAGAAACAGATGGCTTACTTACAGAAGGATTCGAAAGGGGTCAAAGTCTTGAAAAAGGCAGAAAAGAACTATCTTGCAGCCCCACTGCATGCAGAAATTATAGAGCGCAGGTGGGGAGGAAGTAAGAATATGACAGTTGATGATGTGAAGGCTAGAATAAACAATTTGTTGATAGAATATGTCACAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATTAAGGATTTGAAAGTTCCATTCTATCATCATGAGATAGTTAAAAGGGCTCTTATAATGGCAATGGAGAGGCGACAAGCAGAAGGCACCCTATTAGATCTCTTGAAAGAAGCAGCTGAAGAAGGTTTTATCAACTCCAGTCAAACCTCAAAGGGCTTTGATCGGTTGATTGACTCTGTCGATGACTTATCACTCGACATACCAAATGCACGTGAAATTCTCCAAAAGCTAATGTCCAAGGCAGCATCTGAGGGTTGGTTATGTGTTTCATCTTTAAAATCACTCTCACTGGAGCCAGAAAAGAAGTCACTAGAAGAAAGTTTAACTAGAAGTTTCAAGGTAAAAGCTCAGTGCATAATTCAAGAGTACTTCTTGTCAGGTGATATATTTGAAGTGATTAGTTGCCTTGAGCAAGAAAACAACACTTGCTCTGCACACCTCAATGCAATCTTTGTCAAGAGACTCGTAACTTTAGCTATGGATCGGAAGAAGCGCGAGAAAGAAATGGCCTCGGTTCTGCTTTCATCTCTGTGTTTCCCGGCTGATGATGTAGTGAATGGTTTTGTGATGTTGATAGAATCAGCAGATGATACTGCTCTGGATAATCCAGTAGTGGTGGAGGATCTCGCCATGTTCATTGCCAGAGCAGTAGTGGATGAAGTCTTAGCCCCACAACATTTAGAAGAGATTGGAACACAATGTCTGGGACCAGATTCAATAGGAAGCAAAGTGCTTCAAATGGCTAAGTCATTGTTAAAGGCAAGGCTTTCTGGGGAGAGAATATTAAGGTGTTGGGGTGGAGGAGGAAGCAGCAGAAGTGGGTGGGAAATTGAGGATGTTAAGGACAAGATCATAAACCTTTTGGAGGAGTATGAATCTGGAGGCGATATAAGGGAGGCGTGTCGGTGTATGAAAGAACTTGGAATGCCATTTTTCCACCATGAGGTGGTGAAGAAAGCTCTGGTGAAAATCATTGAGAAGAAGAATGACAGGTTGTGGGGTCTGCTCAAGGAATGCTTTGAATCTGGACTCATAACTATGAACCAGATGATGAAGGGCTTTGGAAGGCTTGCAGAATCTCTTGATGACTTGGCTTTGGATGTTCCTGATGCTAAGAAACAGTTTAAACACTACGTTGAACGAGCAAAGAGCTCAGAATGGTTGGATTCTTCTTTCAGTCTCAGCAAATTTGAACATTCAACAGAGAATGGAACCTCCTAA 2298 0.4212 MDISNGSISSDQHRKPHESVSKSADSLSFSSLQTSPKSPRPCGSPRSPRFQGKGSKQSSNHDKHPQSPRDACPKKDSSPVTSLKISPTSPTSPTSPRSPRLPGHSPKNERHSRSPRDGRPKKGGCGGKGTWGGLLDTEDMNIVDPHDPNYDSTEEKEPSNEKNKKRGELDEYKKKATIIVEEYFTTDDIVAVKNELKELGTPYFSYYFVKKLVSMSMDRHDKEKEMSAVLLSALYADTVDPSQVYKGFSKLVESADDLIVDIPDAVDVLALFLARAVVDDILPPAFLKKQMAYLQKDSKGVKVLKKAEKNYLAAPLHAEIIERRWGGSKNMTVDDVKARINNLLIEYVTSGDKKEAFRCIKDLKVPFYHHEIVKRALIMAMERRQAEGTLLDLLKEAAEEGFINSSQTSKGFDRLIDSVDDLSLDIPNAREILQKLMSKAASEGWLCVSSLKSLSLEPEKKSLEESLTRSFKVKAQCIIQEYFLSGDIFEVISCLEQENNTCSAHLNAIFVKRLVTLAMDRKKREKEMASVLLSSLCFPADDVVNGFVMLIESADDTALDNPVVVEDLAMFIARAVVDEVLAPQHLEEIGTQCLGPDSIGSKVLQMAKSLLKARLSGERILRCWGGGGSSRSGWEIEDVKDKIINLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVKIIEKKNDRLWGLLKECFESGLITMNQMMKGFGRLAESLDDLALDVPDAKKQFKHYVERAKSSEWLDSSFSLSKFEHSTENGTS 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1240 765 MobiDBLite consensus disorder prediction 1 168 - -
Lele47g1240 765 ProSiteProfiles MI domain profile. 470 591 IPR003891 -
Lele47g1240 765 MobiDBLite consensus disorder prediction 103 123 - -
Lele47g1240 765 MobiDBLite consensus disorder prediction 140 168 - -
Lele47g1240 765 FunFam programmed cell death protein 4 460 615 - -
Lele47g1240 765 SMART ma3_7 639 748 IPR003891 -
Lele47g1240 765 SMART ma3_7 471 582 IPR003891 -
Lele47g1240 765 SMART ma3_7 172 283 IPR003891 -
Lele47g1240 765 SMART ma3_7 336 447 IPR003891 -
Lele47g1240 765 FunFam programmed cell death protein 4 161 314 - -
Lele47g1240 765 Gene3D - 622 754 - -
Lele47g1240 765 Gene3D - 322 454 - -
Lele47g1240 765 ProSiteProfiles MI domain profile. 335 456 IPR003891 -
Lele47g1240 765 MobiDBLite consensus disorder prediction 56 71 - -
Lele47g1240 765 ProSiteProfiles MI domain profile. 638 757 IPR003891 -
Lele47g1240 765 SUPERFAMILY ARM repeat 331 452 IPR016024 -
Lele47g1240 765 Gene3D - 159 311 - -
Lele47g1240 765 Gene3D - 457 614 - -
Lele47g1240 765 Pfam MA3 domain 337 446 IPR003891 -
Lele47g1240 765 Pfam MA3 domain 472 581 IPR003891 -
Lele47g1240 765 Pfam MA3 domain 640 748 IPR003891 -
Lele47g1240 765 Pfam MA3 domain 173 283 IPR003891 -
Lele47g1240 765 MobiDBLite consensus disorder prediction 22 40 - -
Lele47g1240 765 PANTHER PROGRAMMED CELL DEATH 4 79 751 IPR039778 GO:0045892
Lele47g1240 765 SUPERFAMILY ARM repeat 470 628 IPR016024 -
Lele47g1240 765 ProSiteProfiles MI domain profile. 171 292 IPR003891 -
Lele47g1240 765 SUPERFAMILY ARM repeat 169 329 IPR016024 -
Lele47g1240 765 SUPERFAMILY ARM repeat 634 752 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1240 Lele-ChrLele47 17707684 17710340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1240 638 734 Eukaryotic Initiation Factors Gene Family AT4G30680 30.000 2.72e-06 47.8