Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1235 ATGTTTGCAGCATCGGCGGGACCCATCTTGAACCAGAAATACAACGGCGTTGAGGGCCTCATCGGAAACGCCGCCTGCTCCGGCTTAGCCGTCACAATCGTTGTCTTGTCCATTGGCCACATCTCCGGCGCTCACCTCAACCCCTCCGTCACCATCGCCTTCGCCACCTTCCGCCACTTCCCCTGGCTCCACGTCCCCGCCTACATCGTCGCCCAGGTCTCCGCCTCCATCTGCGCCTCCTTCACCGTCAAGGCACTCTTCCAACCGCTGCTGAACGGAGAAGTCGCCATCCCTTCCGTGAGTACAAGTCTTGGACAGGCTTTTGTGCTGGAGTCCATCATCACTTTCAATCTCATGTTCGTTATCACTGCCGTCGCCACCGATACTCGCGCTGTTGGAGAAATGGCTGGGATTGCTATTGGAACCACAGTTTTGCTCAACATTCTCATTTCTGCGCCGGCAAGTGGGGGATCAATGAACCCGGTGCGGACGTTGGGGGCAGCGGTAGCGGCGGGAAATTACAAGGACTTATGGCTATACTTCATTGCTCCCACCATCGGAGCTCTGGCCGGCGCCGGGGCTTATACCATGATCAAGCTCCGAGACGACGACCCCAACACACAACATCAGCTCGGTGGATTTAGTTTGGTTAATTAG 657 0.5662 MFAASAGPILNQKYNGVEGLIGNAACSGLAVTIVVLSIGHISGAHLNPSVTIAFATFRHFPWLHVPAYIVAQVSASICASFTVKALFQPLLNGEVAIPSVSTSLGQAFVLESIITFNLMFVITAVATDTRAVGEMAGIAIGTTVLLNILISAPASGGSMNPVRTLGAAVAAGNYKDLWLYFIAPTIGALAGAGAYTMIKLRDDDPNTQHQLGGFSLVN 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1235 218 Gene3D Glycerol uptake facilitator protein. 1 210 IPR023271 -
Lele47g1235 218 PANTHER AQUAPORIN NIP2-1 1 203 IPR034294 -
Lele47g1235 218 SUPERFAMILY Aquaporin-like 11 205 IPR023271 -
Lele47g1235 218 Pfam Major intrinsic protein 19 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g1235 218 ProSitePatterns MIP family signature. 45 53 IPR022357 -
Lele47g1235 218 PRINTS Major intrinsic protein family signature 178 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g1235 218 PRINTS Major intrinsic protein family signature 141 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g1235 218 PRINTS Major intrinsic protein family signature 110 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g1235 218 PRINTS Major intrinsic protein family signature 64 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele47g1235 218 PRINTS Major intrinsic protein family signature 27 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1235 Lele-ChrLele47 17667768 17668752 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1235 1 205 Major Intrinsic Protein MIP AT4G10380 70.531 9.23e-104 300