Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1217 ATGGCGGCTGACCCAGTGGAACCTGTGATGTCAGGGTATGGCAGAGCCGGAGAGTTGTCGGCGATGGTTTCGGCGCTTAGGCATGTGGTGTCGTCAGGTTCTTCTGGACACAGAGACACTGATGAATGGATACAAGGAATTACTGGTTTTCCTATGATGTCACCTTTTGGCCAGGTTTCGTCTCGTTTGTCTCTTTCTTCATCTTCTTCAGGTCCCCATACGATCTCTGCCTCTGGTTCATGGGTCAGTCATAAAAGAGGCCGACAAGAAGAAGAAGAAGAAGAAGAATCTCTGTACATAGCCGCCATTGGCGACTTCACTGCACCATTACAGAACGAATCAGGTTCATCAGTGACGGAGGTGGAAGCTTCGAATATCTCTACCACTGATGCATCGGCGGTGGCGGCTGCCGTGACTGTACCGGTGATGCCATCGGGTGAAACTGGTTCGTATGAAGAAACAGGGGAGAGAAGGAGGAGGTACAGAGGAGTGAGGCAGAGGCCGTGGGGTAAGTGGGCAGCGGAGATTCGCGACCCCCACAAGGCGGCAAGGGTCTGGCTCGGCACGTTCGACACGGCGGAGGCGGCCGCCAGAGCTTATGACGAAGCCGCATTGAGGTTCAGAGGTAGCAGAGCCAAACTAAACTTTCCGGAAAACGTCAGAGCAGTCCCGGTGCCAGTTCAAAATTTTCCGGCCACCAGCCACGTCCTTCAGCAGTCCCCGGCGGCGCTTCCGTTCATGCAGGCATCAGCTTATCAGGCGTCCACTGATTTGGTCAGAGACTATTGGAATTACTCCCAGCTTCTACAGAGCGCCGGCGACTTCCAAGGTCAACGGCCGCTACAGGTGCCGCAGCAGATACCGCCGAGTTTGGGGCAGCAGTGGCTCTATAATTCTCAATTGAGTGCTCTTCAATCGTCTTCTTCATTGTTTTCACCAGCATCATCGTTTTCTTCTTCATCTCCCTCTGCATTTTCGCCTTCTAGTCAGTTATCCTCAGCTTCATTTCCCCTGCCTTCTGGTCAGCAAATAGGCTATTTCCGACCACCGGGGAACGAGGCTCACGGAGGAGAAAGCTCATATTTTCCGACGTCAACTTGGTCAGACAGCGGTAACTTTCCACCGCCGTCTAGGTGA 1137 0.5339 MAADPVEPVMSGYGRAGELSAMVSALRHVVSSGSSGHRDTDEWIQGITGFPMMSPFGQVSSRLSLSSSSSGPHTISASGSWVSHKRGRQEEEEEEESLYIAAIGDFTAPLQNESGSSVTEVEASNISTTDASAVAAAVTVPVMPSGETGSYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGSRAKLNFPENVRAVPVPVQNFPATSHVLQQSPAALPFMQASAYQASTDLVRDYWNYSQLLQSAGDFQGQRPLQVPQQIPPSLGQQWLYNSQLSALQSSSSLFSPASSFSSSSPSAFSPSSQLSSASFPLPSGQQIGYFRPPGNEAHGGESSYFPTSTWSDSGNFPPPSR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1217 378 ProSiteProfiles AP2/ERF domain profile. 160 217 IPR001471 GO:0003700|GO:0006355
Lele47g1217 378 PRINTS Ethylene responsive element binding protein signature 161 172 IPR001471 GO:0003700|GO:0006355
Lele47g1217 378 PRINTS Ethylene responsive element binding protein signature 183 199 IPR001471 GO:0003700|GO:0006355
Lele47g1217 378 MobiDBLite consensus disorder prediction 324 378 - -
Lele47g1217 378 MobiDBLite consensus disorder prediction 63 83 - -
Lele47g1217 378 Pfam AP2 domain 160 209 IPR001471 GO:0003700|GO:0006355
Lele47g1217 378 SUPERFAMILY DNA-binding domain 160 218 IPR016177 GO:0003677
Lele47g1217 378 Gene3D AP2/ERF domain 159 219 IPR036955 GO:0003700|GO:0006355
Lele47g1217 378 CDD AP2 168 219 IPR001471 GO:0003700|GO:0006355
Lele47g1217 378 PANTHER DNA-BINDING DOMAIN 119 306 IPR044808 GO:0003700|GO:0009873
Lele47g1217 378 MobiDBLite consensus disorder prediction 358 378 - -
Lele47g1217 378 FunFam Ethylene-responsive transcription factor 2 159 218 - -
Lele47g1217 378 MobiDBLite consensus disorder prediction 324 340 - -
Lele47g1217 378 MobiDBLite consensus disorder prediction 63 94 - -
Lele47g1217 378 SMART rav1_2 160 223 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1217 Lele-ChrLele47 17557464 17558893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1217 123 235 AP2-EREBP Transcription Factor Family AT2G33710 56.303 1.21e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele47g1217 AP2 7.4e-15 CL0081