Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1200 ATGATAATGGAGCTAATGAGTTTTGTGATGTTAGTGATCTGTGCCACATTAGGGCTATCAGTTGTGTGGTTGCTTTACAAAAGCCGATCACCAAAGGAAATGGAAGGTATTCCGGGCAGCCTCGGTTGGCCAATTGTGGGTGAGAGCTTCTCTTTCATCTCTGACTTCTCAAGTCCTTCTGGTATCTTCAACTTCATGAACACCAGACAGCAGAGATTTGGGAAAGTGTTCAAGAGCTTTGTGCTGGGGAGGTTCACTGTGTTCATGACTGGGAGAGAAGCAAGCAAGATATTGCTGACTGGGAAGGATGGCATTGTGAGCTTGAACTTGTTCTACACAGGACAGCAAGTTCTGGGCCCCACCAGCTTGCTTCAAACCACAGGAGAGGCACATAAAAGGCTTAGGAGGCTCATTGCTGAACCCTTATCAGTGGATGGTCTGAAAAAGTATTTTCATTTCATCAATACCCAGGCAATGGAAACATTACATCAATGGTGTGGAAGAAAAGTTTTTGTTCTTGAAGAGGCTTCTACAGTTAAATTTACCCTGAAAGTGATTGGACACATGATCATGAGCTTAGAGCCTACTGGGGAAGAGCAAGAAAAGTTTCGTGCCAATTTCAAGATCATTTCATCATCATTTGCAACTTTGCCTTTCAAGTTTCCAGGAACAGCTTTTCATCGTGGCATCAAGGCCCGAGATAGGATGTATGCGATGTTAGATTCCACAATTTCCAGAAGGAGAAGTGGTGAAGAGTTTCAACAGGATTTCTTAGGGTCCCTGATTACGAAACACACTAAAGTAGCAGATGAAGAAGACAATGAAAACAAACTTACAGATAAGCAAATGAAGGACAATATATTAACTTTGCTGGTTGCAGGCCACGACACTACCACTGCTGCTCTCACTTGGCTCATCAAATTCCTTGAAGAAAACCCTGCAGTTTTGGAGCAACTGAGAGAGGAACACATGCAAATCATAGAAAACAGAAAGGATGTCACAGATCTTACATGGTCTGAAGTGAATAACATGCCTTACACAGCCAAAGTGATTAGTGAAACACTGCGAAGAGCTACAATACTACCTTGGTACTCTAGAAAAGCTTCCCAGGATTTCGAAGTTGATGGATTTAAAATTAAGAAAGGTTGGTCAATCAACCTAGATGTTGTTTCCATACACCACGACCCAGAGATTTTCCCAGATCCTCAGAAGTTTGATCCTTCAAGATTTGATGCAACCTTAAAGCCTTTCAGCTTTCTGGGATTTGGTAGTGGACCACGCATGTGCCCAGGAATGAACCTGGCTAAGATTGAAATTTGTGTTTTCATTCATCACCTGGTCACCAGATACAGGTGGAAGCCTCTGGAGAAAGATGATTGTGTGCAGCCAACTCTTGTGCGGATGCCAAAGAACAAATATCCCATCATGGTTGAGCCACTGTAG 1443 0.4297 MIMELMSFVMLVICATLGLSVVWLLYKSRSPKEMEGIPGSLGWPIVGESFSFISDFSSPSGIFNFMNTRQQRFGKVFKSFVLGRFTVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTTGEAHKRLRRLIAEPLSVDGLKKYFHFINTQAMETLHQWCGRKVFVLEEASTVKFTLKVIGHMIMSLEPTGEEQEKFRANFKIISSSFATLPFKFPGTAFHRGIKARDRMYAMLDSTISRRRSGEEFQQDFLGSLITKHTKVADEEDNENKLTDKQMKDNILTLLVAGHDTTTAALTWLIKFLEENPAVLEQLREEHMQIIENRKDVTDLTWSEVNNMPYTAKVISETLRRATILPWYSRKASQDFEVDGFKIKKGWSINLDVVSIHHDPEIFPDPQKFDPSRFDATLKPFSFLGFGSGPRMCPGMNLAKIEICVFIHHLVTRYRWKPLEKDDCVQPTLVRMPKNKYPIMVEPL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1200 480 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 27 480 - -
Lele47g1200 480 Coils Coil 316 336 - -
Lele47g1200 480 Pfam Cytochrome P450 38 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 Gene3D Cytochrome P450 26 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PANTHER CYTOCHROME P450 26 34 460 - -
Lele47g1200 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Lele47g1200 480 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele47g1200 480 SUPERFAMILY Cytochrome P450 32 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1200 Lele-ChrLele47 17449739 17452736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1200 38 459 Cytochrome P450 AT5G45340 36.385 1.29e-95 294