Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1197 ATGGCATCCAACCAAATACCCAAAATTTCCCTTCAAAGCACAGACCTTGAGGCACAAATCACACCTCTAGAGACGGACCAGAGCACTAATGAAAACAAAGACTTCGATTACTCGAAAAGATCTCAATGGCTAAGGGCTGCAGTTTTGGGAGCCAATGATGGGTTAGTGTCCACAGCATCTCTAATGGTGGGTGTGGGAGCGGTGAAGCAAGACAAGAAAGCCATGATCCTCTCAGGCTTTGCCGGTCTTGTGGCCGGAGCATGCAGTATGGCCATCGGAGAGTTCGTTTCCGTGTACTCGCAGTTAGACATTGAGATCTCTCAGATCAAGAGAGAAAATAACAAGAAAAGTAGGAAATATCAGAAAGAAGAAGAGGAAGAAGAGAAAGAGGATTTGCCAAAGCCATTTCGAGCAGCAGCAGCATCAGCTTTGGCGTTTGCAGTTGGAGCAATGGTGCCATTGCTGGGAGCTTCATTTACAAGAGAGTACAGGTTAAGGTTCGGGGTGGTTGTGGGTGCAGTGAGTTTGGCTTTGGTGGTCTTTGGATGGCTAAGTGCGGTTCTTGGTGGGTCTCCGGCTTTGAGATCTGTGGTTAGGGTCTTGGTTGGGGGTTGGCTAGCAATGGCCATAACTTTTGGATTAACCAAGTTGATTGGCTCAACTAGACTGTAG 672 0.4762 MASNQIPKISLQSTDLEAQITPLETDQSTNENKDFDYSKRSQWLRAAVLGANDGLVSTASLMVGVGAVKQDKKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEISQIKRENNKKSRKYQKEEEEEEKEDLPKPFRAAAASALAFAVGAMVPLLGASFTREYRLRFGVVVGAVSLALVVFGWLSAVLGGSPALRSVVRVLVGGWLAMAITFGLTKLIGSTRL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1197 223 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 24 218 IPR008217 GO:0005384|GO:0030026
Lele47g1197 223 Coils Coil 99 130 - -
Lele47g1197 223 Pfam VIT family 44 126 IPR008217 GO:0005384|GO:0030026
Lele47g1197 223 Pfam VIT family 126 215 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1197 Lele-ChrLele47 17432943 17433614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1197 16 223 Nodulin-like Gene Family AT3G43660 63.942 3.21e-94 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1197 47 17432943 17433614 Lele47g1197 47 17432943 17433614 ECH
Lele45g0109 45 1001042 1003793 Lele47g1197 47 17432943 17433614 hybridization
Lele46g0134 46 772192 774977 Lele47g1197 47 17432943 17433614 hybridization
Lele45g0103 45 951582 952253 Lele47g1197 47 17432943 17433614 hybridization
Lele46g0129 46 728464 729126 Lele47g1197 47 17432943 17433614 hybridization