Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1188 ATGGGAGGGCGACTCTGGTCTGATGATTTGTGGCTGTGGGAGGAGAACTGGGTACAAGAAGGACTTACAGAGAAGCAGATTGAGGCTGCCACCATACAAAATAAGAAACTGCGCCAAAGGAGTCCAACATTTCAATGGTTTCGTGCCGCATCACCGGATTCCGTTTTGATGAGCACCCAAACTGCTTACGTGCATCGCCATCCCATGTGCTTTACTTCGTTTGCCCGCAAGACTCCAGCTACGAGCAGGCGGTACGGCCATGGTGGACGAAATTGCCCTCCATTTTGGTTGAAATCTGGAAACTTTCCCTTTCCTGCCTCAGTCAAAGATCCTGCTATTTCCCTCTCTTTCTCGCATTTTCTCTTCCATTTCCCTCTCTTTCTCGCTTATGAGAGCTCCTCTCCACCGCGCACCTTGAGTGGTTTCGGCAACTTTGATGTGAGGAACGATGTGTACAATCGCTTAGTGGAAAACGGCCATTGCCTAGAGGCGAATTTTCGTGAGCAGCTAGATGCTCACTTCAAACGATTGCCTCCAAGTTATTTGCTTGATGTTAACATAGACAAAGCTGAAGATGTTTTATTACATCAGAAACTTCTTGCTTTGGCAAGGGACCCAAGCAAGCGCCCTGTATACAATATACGCTTTTTGGAGTGTAAAAGAAAAAGAGAGGGGATAGGGGAGAGTGATACGGATTCAGACTTAGTGGCTGAGGAAAGTTTTGTTGGGAAGAACCATAGCTATAGGAAGACCTTATCCTTGAATCTGGTTGGTGAAGGTGCTAATTCTAGCACAAGGCCATCTTCTCCCGCATCTAATGGGGAAGCTGCATCATCTCATAAGAGAGATCGTGAAGCTGAGTTTGAGCCTTGGTCTAAGCTTGAAGATTTAAATTTGGATGTTGGAAAGAACTCCAAGGAGGTTACTGACAACTACTCCCAGATGCGTGAGCAACTGAATGTTCGAGTTCATGAAGTTATATTTTCTGCTATTGACAAGCCAAAGCTTTTAAGTCAGCTGTCTGCGTTGCTGTCTGATATTGGACTTAATATCCGTGAAGCACACGTTTTTTCAACGACTGATGGCTATTCCCTTGATGTATTTGTTGTGGATGGATGGCCAGTAGAGAACACACATGGGTTGTACGAGGCCATGGAGAAAGCTGTTGCAAGAAGTGAGGGGTCTTGGTCTCGTTCTTTAAACTCCCATCCGACTGTGGAGAAGGCCATAATAGCAGAAGCAAAACCTGGTGATTGGGAAATAGACAGGAGGCTGCTTAAGATAGGAGATAGAATAGCATCAGGATCTTGTGGAGATTTGTATCATGGAGTTTATCTTGGTCAAGATGTTGCTGTTAAGATTTTGAGATCTGAGCATTTGAACGATGCTTTAGAGGATGAGTTTGCTCAAGAAGTAGCAATTCTTAGGCAGGTGCATCATAAATATGTTGTTTGTTTCATTGGTGCGTGTACAAAATCTCCACATTTGTGGATTGTAACAGAGTATATGCCTGGAGGAAGTCTGTATGATTACTTGCATAAAAACCATGATATGTTGGAGCTCTCTCAACTGCTGAAGTTTGCGATTGATGTCTGCAAGGGTATGGAGTATTTACACAGAAACAATATAATTCACAGGGATCTGAAGACAGCCAATCTATTGATGGATACCCACAATGTTGTTAAAGTAGCAGATTTTGGAGTAGCTCGGTTCCTGAATCAGGGGGGAGTGATGACAGCTGAAACTGGAACATATAGATGGATGGCTCCAGAGGTTATAAACCATCAACCCTATGATCAGAAAGCTGATGTATTCAGTTTTTCCATAGTACTGTGGGAACTAGTAACTGCAAAGGTACCATATGATGCCATGACTCCACTACAAGCTGCCCTAGGAGGGTTACGCCCAGAACTTCCAAAGCAAGGGCACCCTAAACTAATAGATTTAATGCAAAGATGTTGGGAAGCAATTCCAGCCAACCGGCCATCCTTCTCTGAGATAACAGTTGAACTGGAAAATCTCCTTAAAGAAGTTGAGAATGATTCAGAAACTAACGATCCAGCTGGTGATTTTTCCTTTTCCTCACGTCGCTTCATCGGTCGTAGCTCTGTTAATACCTCATCTACCATTGACTTCAGTATAGTCATATCATCGCTCCGTTGTTCCACTCTCTGCTCATTCAAAGTTACGCGTGAACTCAAATCGTCCATGGCTCGAGTGTTGACCATCACCAGGACCACAAGTGCTCTGATACCTTTGATGGAAACTCTACAGAGATATGTATTATTCACTGAAAGGGAAAGGCTTCACAGAGCAAACTCTAATAGAGGAATACAAAACAGAAAGGAAGAACACAACTCCAGTGGGGCATTCGAGAGGCACTCCACTCTCCTCACAACTCTCCAATATTTGCTGTGCCCCTCTCAAACAACTCTAGCTGACGTATGA 2448 0.4412 MGGRLWSDDLWLWEENWVQEGLTEKQIEAATIQNKKLRQRSPTFQWFRAASPDSVLMSTQTAYVHRHPMCFTSFARKTPATSRRYGHGGRNCPPFWLKSGNFPFPASVKDPAISLSFSHFLFHFPLFLAYESSSPPRTLSGFGNFDVRNDVYNRLVENGHCLEANFREQLDAHFKRLPPSYLLDVNIDKAEDVLLHQKLLALARDPSKRPVYNIRFLECKRKREGIGESDTDSDLVAEESFVGKNHSYRKTLSLNLVGEGANSSTRPSSPASNGEAASSHKRDREAEFEPWSKLEDLNLDVGKNSKEVTDNYSQMREQLNVRVHEVIFSAIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVENTHGLYEAMEKAVARSEGSWSRSLNSHPTVEKAIIAEAKPGDWEIDRRLLKIGDRIASGSCGDLYHGVYLGQDVAVKILRSEHLNDALEDEFAQEVAILRQVHHKYVVCFIGACTKSPHLWIVTEYMPGGSLYDYLHKNHDMLELSQLLKFAIDVCKGMEYLHRNNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDAMTPLQAALGGLRPELPKQGHPKLIDLMQRCWEAIPANRPSFSEITVELENLLKEVENDSETNDPAGDFSFSSRRFIGRSSVNTSSTIDFSIVISSLRCSTLCSFKVTRELKSSMARVLTITRTTSALIPLMETLQRYVLFTERERLHRANSNRGIQNRKEEHNSSGAFERHSTLLTTLQYLLCPSQTTLADV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1188 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Lele47g1188 815 Pfam Protein tyrosine and serine/threonine kinase 426 670 IPR001245 GO:0004672|GO:0006468
Lele47g1188 815 SUPERFAMILY Protein kinase-like (PK-like) 418 680 IPR011009 -
Lele47g1188 815 FunFam Serine/threonine-protein kinase isoform 1 417 504 - -
Lele47g1188 815 Gene3D Phosphorylase Kinase; domain 1 415 503 - -
Lele47g1188 815 CDD STKc_MAP3K-like 432 671 - -
Lele47g1188 815 PRINTS Tyrosine kinase catalytic domain signature 500 513 IPR001245 GO:0004672|GO:0006468
Lele47g1188 815 PRINTS Tyrosine kinase catalytic domain signature 537 555 IPR001245 GO:0004672|GO:0006468
Lele47g1188 815 PRINTS Tyrosine kinase catalytic domain signature 642 664 IPR001245 GO:0004672|GO:0006468
Lele47g1188 815 PRINTS Tyrosine kinase catalytic domain signature 583 593 IPR001245 GO:0004672|GO:0006468
Lele47g1188 815 MobiDBLite consensus disorder prediction 259 285 - -
Lele47g1188 815 ProSiteProfiles Protein kinase domain profile. 426 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1188 815 ProSiteProfiles ACT domain profile. 325 399 IPR002912 -
Lele47g1188 815 Gene3D Transferase(Phosphotransferase) domain 1 504 708 - -
Lele47g1188 815 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 249 679 - -
Lele47g1188 815 SUPERFAMILY ACT-like 324 391 IPR045865 -
Lele47g1188 815 SMART serkin_6 426 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1188 815 MobiDBLite consensus disorder prediction 259 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1188 Lele-ChrLele47 17342073 17354242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1188 145 691 MAP Kinase Kinase Kinase AT4G35780 47.452 2.77e-164 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele47g1188 PK_Tyr_Ser-Thr 2.8e-69 CL0016