Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1163 ATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCCCATTCATCATCAAGTTCTGGAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGACTCTCACTTAAGCTCATGTTTCGGTAACACATCCAACTCATTTCCTGGAACTGGACGTTCAAATCTGGGTCCAGTTTCTGGTGACATGAGTGGTGCAATTCTAAACAGTGTGGCAAATTCAGGGCCAAGTGTTGGAGCTAGTTCGTTAGTCACAGATGCTAACTCTGCACTATCTAGGGGACCCCGTTTGCAGAGAAGCGCTAGCAATAACACAGAATCATACTTACGTTTACCTGCATCACCCATGTCATTCTCATCAAATAATATTAGTATTTCGGGGTCATCAGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTCTCATCAAGACCAGAATGTTCAACAACTGCAAAAGAATCATGAGCAAATGCAGGGTGCTTCTAGTGCAACATCTCTGCCTGCAGCTCAAACTGGCCCATCTCCAGTGCCAATGGATACGCGAGGACCTGGATCTTTGATACAAGATCCAAATAATCTATCCCAGATGCATAAGAAACCTCGGATTGATACCAAGCAAGAAGATATAATGCATCAGCAGGTAATACAACAGCTTCTTCAGAGGCAGGATCCCATGCAGTTCCAGGGCCGTAATCCCCAACTACAGGCTTTGCTCCAGCAGCAGAGACTGAGGCAACAGCAACAGCAACAGCAACAAATCCTTCAGTCAATGCCACAGTTACAGAGAGCTCACTTGCAACAGCAGCAGCAGCAGCAGCAGCAACATATGCAATTGAGGCAACAATTACAACAACAAGCAACGCAACCGTTGTCTTCCATGAAGCGCCCATATGATAGTGGCGTGTGCGCCCGTCGTTTGATGCAATACTTGTATCATCAAAGGCAGCGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAGCGGTGGTGTTTGTCATTATATGAGAATGTCGGGCAACATACTCTTGGTGTTTTCCCCCAAGCAGCCATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCGAGACTTAACGAAATCAAATTTGGCAGTGGGGTGATTGATGAACTTATGTTTTTGGACTTGCCTCGTGAGTATAGATTTCCTTCTGGTTTAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGCGTGCATGAGCAACTTCGTGTTGTTCGTGAGGGTCAACTTCGCATCATATTTACACAAGATCTGAAGATACTATCTTGGGAGTTTTGTGCAAGACGCCATGAAGAACTTATTTCTCGAAGGTTGGTTGCACCACAGGTCAACCAACTGGTTCAAGTGGCTGAAAAGTGCCTGCGATGTATTACTGAAAGTGGGTCTGATGGGATCTCTCAGCAGGATTTGCAGACAAACAGCAATATGGTAATAGTGGCTGGTTGTCAGCTGGCAAAGAGTTTGGACTTACAGTCTCTCAATGACTTGGGTTTCTCAAAACGATACGTGAGATGTTTGCAGATATCAGAGGTTGTGAATAGCATGAAAGATCTGATGGATTTCTGCCGAGAGCGGAAAGTTGGGGCACTTGAGGGCTTGAAAAGTTATCCTAGGCATGCAACTGCAGCCAAGCTCCAGATGCAAAAGATGCAGGAGATGGAACAGTTAGCGGGTGTTCAAGGTCTGCCAACTGACCGAAACACACTTGATAAGCTAATGGCATTGCATCCTGGATTGAATAACCAAATCAACAACAACCCTAACCTTGTTATTCGGGGCACTTTAAGTGGATCTGCACAAGCTGCATTGGCACTGACTAACTACCAGAATCTCCTCATGAGGCAAAACTCCATGAATTCAACCCCTAACTTGCTTCAGCGAGAAGCATGTTCTTCCTTTAATAATTCAAACCAGAGTCCCTCTTCACACTTCCAAGGTGCCGCTGCTGCTTTGCTTCCAGGCCCCATGCAGAATTTACCTGTCAGTGGTTTCTCGAGCCCCCATCTATCTCCACTGCAGCAACAACAGCAACAGCAGCTACAACAACTAAAACAGCGCTCGTTGAGTGGGAATAGCTTGCTGCATCAAAATCATCCACAGGGCTCCCAAACAAATCAGGCTCTACCTCCTCAGATGCTCCAGCAACTAGTTCAGGAATTGTCGAATAACAGCGGTGGTGGAGTTCAACAGCAGTTCCATGCTGGACCCAACCCCAATGGAAATATTACAAATAATGGTTTGGGTTTTGGAGGTAACCCTCCACCAGCAGCGTCTGTAGGAACTTCTAATGTTTCTGGAAGTAATGGACCTGCTGCTCCGAGCAGGAGCAACAGCTTCCAAGCTGCTTCAAACAGTGATTCTTCTGCTGCTGGTGGCAACAATGGATTCAACCAAAGAACATCTGATATGCCACAAAATCTCCATCTGCAAGATGTGGTTCAGGATATTGCTCGAGAGTTCACTGATAATGGCTTCTTTAACAGTGACCTCGATGACTATGGGTGGAAGGCATGA 2601 0.4571 MAPSRVAGGLAHSSSSSGIFYQGDGQSQNAVDSHLSSCFGNTSNSFPGTGRSNLGPVSGDMSGAILNSVANSGPSVGASSLVTDANSALSRGPRLQRSASNNTESYLRLPASPMSFSSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQKNHEQMQGASSATSLPAAQTGPSPVPMDTRGPGSLIQDPNNLSQMHKKPRIDTKQEDIMHQQVIQQLLQRQDPMQFQGRNPQLQALLQQQRLRQQQQQQQQILQSMPQLQRAHLQQQQQQQQQHMQLRQQLQQQATQPLSSMKRPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYENVGQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNEIKFGSGVIDELMFLDLPREYRFPSGLMMLEYGKAVQESVHEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELISRRLVAPQVNQLVQVAEKCLRCITESGSDGISQQDLQTNSNMVIVAGCQLAKSLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRERKVGALEGLKSYPRHATAAKLQMQKMQEMEQLAGVQGLPTDRNTLDKLMALHPGLNNQINNNPNLVIRGTLSGSAQAALALTNYQNLLMRQNSMNSTPNLLQREACSSFNNSNQSPSSHFQGAAAALLPGPMQNLPVSGFSSPHLSPLQQQQQQQLQQLKQRSLSGNSLLHQNHPQGSQTNQALPPQMLQQLVQELSNNSGGGVQQQFHAGPNPNGNITNNGLGFGGNPPPAASVGTSNVSGSNGPAAPSRSNSFQAASNSDSSAAGGNNGFNQRTSDMPQNLHLQDVVQDIAREFTDNGFFNSDLDDYGWKA 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1163 866 MobiDBLite consensus disorder prediction 687 714 - -
Lele47g1163 866 MobiDBLite consensus disorder prediction 688 714 - -
Lele47g1163 866 MobiDBLite consensus disorder prediction 785 834 - -
Lele47g1163 866 Pfam LIM-domain binding protein 303 563 IPR029005 -
Lele47g1163 866 MobiDBLite consensus disorder prediction 752 777 - -
Lele47g1163 866 MobiDBLite consensus disorder prediction 127 169 - -
Lele47g1163 866 MobiDBLite consensus disorder prediction 127 202 - -
Lele47g1163 866 PANTHER LIM DOMAIN-BINDING PROTEIN 42 855 IPR029005 -
Lele47g1163 866 Coils Coil 263 286 - -
Lele47g1163 866 MobiDBLite consensus disorder prediction 752 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1163 Lele-ChrLele47 17098799 17104011 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1163 291 569 C2H2 Transcription Factor Family AT1G43850 57.348 1.22e-106 347