Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1161 ATGAATGTATTTGAGCTTCAAAAGCGCGTCAAAAGCGAATTCCATCTCCCAGTCATCATTATGTCTGCAGATAGGAGGAAGAGTGTGATGTCGAAGAGTTTAGTGCAAGGAGCAGCATTTTGCTTAGTGAAACCAGTTCGAAGGGAGGACTTGAGAGATGTGTGGCAGTATGCTGTGGCTGGGAGGAGAGAGAAACTGAGAGTTGAGAATGGCAGAATAGTATCAATAAGAGACAAAGAAGAAGAAGGAGACTCAGCATCATCACCAGGTGGCATTAATAATATAGCCTCTACACAGAATTCAACATCGCCTAATAAAAAGCAAAGGAAGAAGTATTGCAAGAGAAATCGTAGCGAGGTGGTTGAGCATGAAGGACTCGTATTCAGTGGTCCAAAGAGGTCCAAGATTTGCTGGACTGTTGAACTTCACAGTCGCTTCTTGTTGGCCTTAAGGCACCTTGGCATGGACAAGGCTGTTCCAACCAAGATTCTTGAGATCATGAACGTGCCAGGTTTAACCAGAGAAAATGTTGCCAGTCATTTGCAGAAGTATCGTTTGTTTCTGAAGAGAATTGCTGAGAAAGGAATCCTTGAGGGATTACCTGAGAGAGCGTTGAGGTCAAGGTTTGCTATGGGACTTCCCGCGGATCTCATCAGAGACATCCAAAAAAGAGTTCGTCATTTTCATCTTCGTGAAACTTATTATCATCAACCTTACAGTAGTTCCCTTGTGCCCGGGCCTCAGATTCCTCAAACCAGACTGGTCCCACCACCAAACCACTATGGTGGGACCAATCATACTACTTACGGAAACTTCCATCAACCCTATTATCATAATCTTCATCGTCCTCTCGTAAATGGAGGAGGGTTCATGACTTCTACAAATGCCCTCACTGCAAATAATGGTTTGATGAGTAACTATCCCAATCCCTCACTGGTGGGGAACAACATAAGCTTCAACTATGGCCCATCTAATTATGATAATAATAATAATAATAATCATGGTATGATGGTGCCTTATGGAAGCTCTGGCTTGCAACGAAATCCTAGGACATATAATAACCACCATAGAACTCAACTGAACAACGACAACAATAACTATGGGGTGATAGTGTCTACTGGAAGGTCTGGCCTGCAACGAAGTCCAAGTACTTATAATAACCACCATGGAACTCAACTGAACAACAACGCTTCTCTTACAGTTGGTGCGTTGAATCGAGTTCAGAATGTTGATTCTACCGGTCATAACAGTAATGGGAGTGCTTCAAATAATGCAATTGTGCCTGTCTCATCATCCTCAGTTGAACCAACTCGACCAAACATATCTGCTGGTCTTCCTTCTTTGCCTCATCAGTCAATTAGTGGTATTAGGAATGCTATCACTTCTGTGAATCAGCGAGAAGTTGGTCAAATGGATGATTTTAATGAACTTCTCCTCATGCTAGACGACATGGTTTCTCTTGACAAGACTGCAGAGAGCCCTCGTACTGGTGAACGTTCAACTTCTGACATTCTTAGCTCCTTCAATATTGAAGACTACGTTGAGCTGGGAGATGGTGCTCAAACAAGTGAAAGAAGCATCAATGTTCTGCCGAACAAGTCCTCATCATCTGGCACCAACGAAAACCCTCATATGGTGATGAGGAACGAGGAGGCATCCACAAACCTGGAGCACTTGAACATGTTCATGACGGACAAGGATAATTCACCATCAGGAAACTCAACTCCTGATCAAGAGCAGGCAAGCCATCTTGATTGGGACATGGATCTCATTGAAACGTTGATCTTCGATGCTGCAGATCCCAGCCAGAACCTGCAGAAATCAAAGAAGAAAATGTCCTTCCATTCCAATTGCATTTTCTCTCCTTATTTTCCTGCCAATGATCCTCAGAGATTCACTTGTGTTCACCGAATATATGGTGGAAGCAAGGTTGAGAGAATTGTTCAGTGTTGGCATGATATCCTAGTTAGTCTACAATACCAGTCAAGCCTGGCTCTAGAGAGCTACTCAGACTCCAGTCAACATGGGGCGGTGCCCCCCATGGCACCTTCTCGGGTGGCTGGAGGGTTAGCTCATTCAAGTTCTCAAATATTCTATCAAGGAGATGGGCAATCACAGAATGCTGTTGATTCTCACTTTAGTTCGTGTTTTGGTAACACATCCAACTCATTTCCTGGAACTGGACGTTCAAATCTGGGTCCAGTTTCTGGTGACATGAGTAATGCAATTCTAAACAGTGTGGCAAATTCAGGGCCAAGTGTTGGAGCTAGCTCATTAGTCACAGATGCAAACTCTGCACTATCTGGGGGACCCCGTTTGCAGAGAAGCGTTAGCAATAACACAGAATCATACTTACGTTTACCTGCATCACCCATGTCATTCTCGTCAAATAATATTGGTATTTCGGGGTCATCAGTTATGGATGGTTCTTCCGTAGTACAGCAGAGCTCTCATCAAGACCAGAATGTTCAACAACTGCAAAAAAATCTTGAGCAAATGCAGGGTGCTTCTAGTGCAACATCTTTGCCTGCAGCTCATACTGGCCCAGCTCCAATGCCAATGGGTACGCGAGGTCCTGGATCTTTGATACAAGATCCAAATAATCTATCCCAGATGCAGAAGAAACCTCGGATTGATATCAAGCAAGAAGATATAATGCATCAGCAGGTAATACAACAGCTTCTTCAGAGGCAGGATCCCATGCAGTTTCAGGGTCGTAATCCCCAACTACAGGCTTTGCTCCAGCAGCAGAGACTGAGGCAACAGCAACAGCAGCAGCAGCAACAAATCCATCAGTCAATGCCACAGTTACAGAGAGCTCACTTGCAACAGCAGCAGCAGCAACATATGCAATTGAGGCAGCAATTACAACATGAAGCAATGCAGTCGTCGTCTTCCATGAAGTGCCCATATGATAGTGGTGTGTGTGCCCGTCGTTTGATGCAATACCTATATCATCAAAGGCAGCGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAGCGGTGGTGTTTGTCATTATATGATAATGTCACGCAACATACTCTCGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGACATATGTGGTTCGAAATCAGGAAGGGGATTTGAGGCAACTTTTGAAGTACTCCCCAGACTTAACAAAATAAAATTTGGCAGTGGGGTGATTGATGAACTTGTGTTTTTGGACTTGCCGCGTGAGCATAGATTTCCTTCTGGTTTAATGATGTTAGAATATGGAAAGGCAGTTCAAGAGAGTGTGCATGAGCAGCTTCGTGTTGTTCGTGATGGTCAACTTCGCATCCTATTCACACAAGATCTGAAGATACTATCTTGGGAGTTTTGTGCAAGACGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAGCCAATTGGTTCAAGTGGCTGAAAAGTGCCATCGTTCTATTACTGAAAGTGGATCTGAGGGGCTTTCTCAGCAGGATTTGCAGACAAACAGCAATATGGTAATAACGGCTGGGTGTCAGCTGGCAAAGAGTTTGGACCTACAGTCTCTGAATGACTTGGGTTTCTCAAAACGATACGTGAGATGTTTGCAGATATCGGAGGTTGTGAATAGCATGAAAGATCTGATGGATTTCTGCCGGGACCACAAAGTTGGGGCTCTTGAGGGCTTGAAAAATTATCCTAGACATGCAACTGCAGCCAAGCTTCAGATGCAAAAGATGCAGGAGATGGAACAATTAGCTAATGTTCAAGGTCTGCCAACTGACCGGAACACACTTAAGAAGCTAATGGCATGGCATACTGGATTGAATAACCAAATCAACAATAACCCTAACCTTGTTAATCGCGGTGCTTTGAGTGGATCTGCACAAGCTGCATTGGCACTGACTAACTACCAGAATATCCTCATGAGGCAAAACTCCATGAATTCAACCCCCAACTCACTTCAGCGAGAAGCATCTCCCTCCTTCAACAATTCAAACCAGAGCCCCTCTTCACACTTTCAAGGTGCTGCTTCTGCTTTCCTTCCAGGCTCCATGCAGAAGTTACCTGTCAGCGGTTTCTCTAGTCCCCATCTAACTCCACAGCAGCGGCAGCAGCAGCTGCAACAACTTAAACAGCACTCATTAAGTGCGAATAGCTTGCTGCAACAAAATCATCCACAGGGCTCCCAAATAAATCAGGCTCTACCACCCCAGATGCTCCGGCAACTAGTTCAGGAATTGGCGAATAACAACGGTGGTGGAGTTCAATCGCAGTTCCACACTGGACCCAACTCTAATACAAATGATGGTTTGGGTTTTGGAGGTAATCCTCCAACAGCATCTGGAGGAACTTCCAATGTTTCCGGAAGTAACAGACCTGCTGCTCCTAGCCGGAGCAACAGCTTCAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAATGGATTCAACCAAAAAACATCTGATATACCACGAAATCTTCATCTGCAAGATGTGGTTCAGGATATTGCCCGTGAATTCACCGATAATGGCTTCTTTAATAGTGACCTCGATGACTATGGGTGGCATGACTAA 4611 0.4463 MNVFELQKRVKSEFHLPVIIMSADRRKSVMSKSLVQGAAFCLVKPVRREDLRDVWQYAVAGRREKLRVENGRIVSIRDKEEEGDSASSPGGINNIASTQNSTSPNKKQRKKYCKRNRSEVVEHEGLVFSGPKRSKICWTVELHSRFLLALRHLGMDKAVPTKILEIMNVPGLTRENVASHLQKYRLFLKRIAEKGILEGLPERALRSRFAMGLPADLIRDIQKRVRHFHLRETYYHQPYSSSLVPGPQIPQTRLVPPPNHYGGTNHTTYGNFHQPYYHNLHRPLVNGGGFMTSTNALTANNGLMSNYPNPSLVGNNISFNYGPSNYDNNNNNNHGMMVPYGSSGLQRNPRTYNNHHRTQLNNDNNNYGVIVSTGRSGLQRSPSTYNNHHGTQLNNNASLTVGALNRVQNVDSTGHNSNGSASNNAIVPVSSSSVEPTRPNISAGLPSLPHQSISGIRNAITSVNQREVGQMDDFNELLLMLDDMVSLDKTAESPRTGERSTSDILSSFNIEDYVELGDGAQTSERSINVLPNKSSSSGTNENPHMVMRNEEASTNLEHLNMFMTDKDNSPSGNSTPDQEQASHLDWDMDLIETLIFDAADPSQNLQKSKKKMSFHSNCIFSPYFPANDPQRFTCVHRIYGGSKVERIVQCWHDILVSLQYQSSLALESYSDSSQHGAVPPMAPSRVAGGLAHSSSQIFYQGDGQSQNAVDSHFSSCFGNTSNSFPGTGRSNLGPVSGDMSNAILNSVANSGPSVGASSLVTDANSALSGGPRLQRSVSNNTESYLRLPASPMSFSSNNIGISGSSVMDGSSVVQQSSHQDQNVQQLQKNLEQMQGASSATSLPAAHTGPAPMPMGTRGPGSLIQDPNNLSQMQKKPRIDIKQEDIMHQQVIQQLLQRQDPMQFQGRNPQLQALLQQQRLRQQQQQQQQQIHQSMPQLQRAHLQQQQQQHMQLRQQLQHEAMQSSSSMKCPYDSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYDNVTQHTLGVFPQAAMDAWQCDICGSKSGRGFEATFEVLPRLNKIKFGSGVIDELVFLDLPREHRFPSGLMMLEYGKAVQESVHEQLRVVRDGQLRILFTQDLKILSWEFCARRHEELLPRRLVAPQVSQLVQVAEKCHRSITESGSEGLSQQDLQTNSNMVITAGCQLAKSLDLQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCRDHKVGALEGLKNYPRHATAAKLQMQKMQEMEQLANVQGLPTDRNTLKKLMAWHTGLNNQINNNPNLVNRGALSGSAQAALALTNYQNILMRQNSMNSTPNSLQREASPSFNNSNQSPSSHFQGAASAFLPGSMQKLPVSGFSSPHLTPQQRQQQLQQLKQHSLSANSLLQQNHPQGSQINQALPPQMLRQLVQELANNNGGGVQSQFHTGPNSNTNDGLGFGGNPPTASGGTSNVSGSNRPAAPSRSNSFKAASNSDSSAAGGNNGFNQKTSDIPRNLHLQDVVQDIAREFTDNGFFNSDLDDYGWHD 1536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1161 1536 MobiDBLite consensus disorder prediction 805 844 - -
Lele47g1161 1536 Pfam Lateral organ boundaries (LOB) domain 615 650 IPR004883 -
Lele47g1161 1536 ProSiteProfiles Response regulatory domain profile. 1 59 IPR001789 GO:0000160
Lele47g1161 1536 MobiDBLite consensus disorder prediction 1426 1502 - -
Lele47g1161 1536 FunFam Two-component response regulator 129 192 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 521 544 - -
Lele47g1161 1536 PANTHER LIM DOMAIN-BINDING PROTEIN 720 1525 IPR029005 -
Lele47g1161 1536 SUPERFAMILY CheY-like 1 64 IPR011006 -
Lele47g1161 1536 Pfam LIM-domain binding protein 979 1239 IPR029005 -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 78 116 - -
Lele47g1161 1536 Coils Coil 939 962 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 924 948 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 562 581 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 805 856 - -
Lele47g1161 1536 Gene3D - 131 192 - -
Lele47g1161 1536 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 189 IPR017930 -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 519 544 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 411 439 - -
Lele47g1161 1536 Coils Coil 816 836 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 1323 1353 - -
Lele47g1161 1536 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 134 187 IPR006447 GO:0003677
Lele47g1161 1536 SUPERFAMILY Homeodomain-like 131 190 IPR009057 -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 87 106 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 1323 1388 - -
Lele47g1161 1536 MobiDBLite consensus disorder prediction 1364 1388 - -
Lele47g1161 1536 Gene3D - 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1161 Lele-ChrLele47 17080588 17090985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1161 967 1245 C2H2 Transcription Factor Family AT1G43850 57.706 3.80e-102 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele47g1161 LIM_bind 3e-56 No_clan