Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1159 ATGACAAACTTTCGGAAGAGAAAACATAAGCAGAAGAAAGGGAAAACACACATGAAAGTTGAAAATGAAAAGCAGAGAAAGAAAGTACCTTTGGTCGAAGGGATCGAAAGGAACCAGAAGATAAATTACCCCGACCCATGTCAACGACGAGGAAGCGAACCTCTTCGCAATGCAATTGGCCAAGCCTCCATGCTTACCATGATTCTGAAATCAGCTCTCGAGCTGGATTTGCTCGAGATCATCGTCAAGGCTGGCCCTGATGCTGAGCTTTCCCCCTCCAAAATTGCCGCTCAGCTGCCGACTAAGAACCCGGACGCCGCCGTGATGCTCGACCGCATGATGCGGCTATTGGCCTGCTACAACGTACCGAGCTGCTTGGTCCGAACCCTTCCCGACGGCAAGATTGAGAGGCTCTACGGGCTTACCCCCGTCGCTAATTATTTGGTCAAGAATGAAGATGGCGTCTTTATCACTCCTCTCAGCCTAATGAATCAGGACAAAGCCCTCATGGAGTGCTGCTGCACCTTGTGA 531 0.5028 MTNFRKRKHKQKKGKTHMKVENEKQRKKVPLVEGIERNQKINYPDPCQRRGSEPLRNAIGQASMLTMILKSALELDLLEIIVKAGPDAELSPSKIAAQLPTKNPDAAVMLDRMMRLLACYNVPSCLVRTLPDGKIERLYGLTPVANYLVKNEDGVFITPLSLMNQDKALMECCCTL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1159 176 MobiDBLite consensus disorder prediction 1 30 - -
Lele47g1159 176 Gene3D - 63 176 IPR036388 -
Lele47g1159 176 SUPERFAMILY "Winged helix" DNA-binding domain 62 152 IPR036390 -
Lele47g1159 176 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 57 176 IPR016461 GO:0008168
Lele47g1159 176 MobiDBLite consensus disorder prediction 16 30 - -
Lele47g1159 176 FunFam Caffeic acid 3-O-methyltransferase 49 148 - -
Lele47g1159 176 Pfam Dimerisation domain 67 118 IPR012967 GO:0046983
Lele47g1159 176 PANTHER O-METHYLTRANSFERASE 61 172 IPR016461 GO:0008168
Lele47g1159 176 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1159 Lele-ChrLele47 17072984 17074131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1159 59 171 Monolignol Biosynthesis Gene Families AT5G54160 60.177 3.71e-37 129