Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1149 ATGGCTCCGCCGCGGGTGGACCACAACGGCGAGTCCACGGCCGGTGACACCCAGAGATCTATTCCAACGCCGTTTCTCACCAAAACATATCAGCTCGTCGACGATCACACCATAGACGATGTGATTTCGTGGAACGAAGACGGATCTACTTTCATCGTTTGGAACCCTACCGAATTCGCCAGAGATTTGCTCTCTAGATATTTTAAGCACAACAACTTCTCTAGCTTTGTTCGCCAACTCAACACCTATGGATTCAGGAAGGTTGTACCTGATCGGTGGGAATTCTCGAACGAGTGTTTCCGTAGAGGCGAGAAACGGCTTCTGTGCGAAATACAGCGACGGAAGATTTCAACGCCTTCACCTTCGCCGCCGACAGTGACGGCGAAGGCCGGAGCCACTCCGACTGTGGCAGTACCGGCGCCAGTTCCGTTGACTTCTATACCGACGGCGATGCCGATGATATCGCCATCAAACTCAGATGAGGAGCAAGTGATTTCGTCGAATTCGTCGTCCTCAAAAGCTCCGGCTGAGCTCATGGATGAGAACGACAGGCTGCGAAAAGAGAACGTGCAGCTGTCGAAGGAATTAGCCGAGATGAGATCTCTCTGCAGCAATATTTTCTCTCTGTTGTCCAACTACGCCAACAACCAAATCGATGGTGCCGGGCAAGGAAAAGACAGAGTGAAAACGCTGGATTTGAAGCCGTCGAAACGGAACTCCGGTGAGGAGCCGTCGGCGGTGGATGAGTTAAATCCGAAGCTGTTTGGGGTGGCGATTGGGGCGAAGAGAGCGAGAGGAGCGGAGGAGGAGGACACACTGTTAAGCTTGCATCAGCCGGGGCCAGCGGAAGTGAAGTCTGAGCCGTTGGATTGTCAGAACCCTCGAGAGAATCAGGAGACACCGTGGCTGAGTCAATGCGATATAGCAAATCAGAAAGTGTGTAATTGGCACACGAGCGAGGGAATACGATTAGACTAG 978 0.5256 MAPPRVDHNGESTAGDTQRSIPTPFLTKTYQLVDDHTIDDVISWNEDGSTFIVWNPTEFARDLLSRYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRRGEKRLLCEIQRRKISTPSPSPPTVTAKAGATPTVAVPAPVPLTSIPTAMPMISPSNSDEEQVISSNSSSSKAPAELMDENDRLRKENVQLSKELAEMRSLCSNIFSLLSNYANNQIDGAGQGKDRVKTLDLKPSKRNSGEEPSAVDELNPKLFGVAIGAKRARGAEEEDTLLSLHQPGPAEVKSEPLDCQNPRENQETPWLSQCDIANQKVCNWHTSEGIRLD 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1149 325 MobiDBLite consensus disorder prediction 218 247 - -
Lele47g1149 325 MobiDBLite consensus disorder prediction 225 244 - -
Lele47g1149 325 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g1149 325 Coils Coil 182 202 - -
Lele47g1149 325 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Lele47g1149 325 MobiDBLite consensus disorder prediction 156 177 - -
Lele47g1149 325 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g1149 325 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 217 IPR027725 -
Lele47g1149 325 FunFam Heat stress transcription factor B-4 17 115 - -
Lele47g1149 325 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g1149 325 MobiDBLite consensus disorder prediction 1 21 - -
Lele47g1149 325 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g1149 325 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g1149 325 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele47g1149 325 MobiDBLite consensus disorder prediction 156 176 - -
Lele47g1149 325 MobiDBLite consensus disorder prediction 277 298 - -
Lele47g1149 325 Gene3D - 17 115 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1149 Lele-ChrLele47 16986269 16987335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1149 1 315 HSF AT5G62020 47.904 7.18e-90 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele47g1149 HSF_DNA-bind 1.4e-32 CL0123