Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1134 ATGGGGAGGTCACCATGTTGTGATAAAAATGGAGTGAAAAAGGGAGCTTGGACTCCTGAAGAAGATGAACTCTTAGTTGAGTACATCAAGAAACATGGCTGTGGTAATTGGCGGACACTACCCAAGAACTCAGGTCTACTTCGATGTGGAAAAAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGACATCAAGCGTGGCCCGTTTACTAGTGAAGAAGAAGGCAAAATTATTCAACTTCATGGCATGCTCGGCAACAGGTGGGCTGCTATAGCATCTCATTTACCAGGAAGAACCGACAATGAAATTAAGAACTATTGGAACACTCATCTGAAGAAGCGCTTCATTCACTCAGGTCATTCTCTGGAGTCACAAGAGCCATCTTTTGGTCCTCATCAACAAAGTGATATGAAATATGAATCTTCATCTGTACGTCATGTAATCCAGTGGGAAAATGCCAGAGTTGAGGCAGAGAAAAGGCTGTCAATGGAATTGGAATCCTCATGTCTTAATCATTGTTCCCAAACTCACACACATTCTGACTGCTTTCTTCGACTTTGGCACTCCGAGGTAGGGCAATCATTTCGCATGATCACAGAAAAGAAAGCGGAAAGCGAAAGCCCTACCTCGCAAGCGAGCAGTGTCTTTGCCAACATGGCTCAAGAACAAGCAAGCAGCTGCAATCCAAAGCTTGACGAAGGCACAGCTGGGTCAGACTCAGGTTCTCTTGAATTTCTTGATGCCTCTGATTCTGCATTGAAGCTCCTGCTAGATATGCCTCATGACAATGTGGGATTCTTTGAAGGATTGGAACAGAGTGAGAATTTCCAGGGTCCTCTGCATGATAGATATGACTAA 861 0.446 MGRSPCCDKNGVKKGAWTPEEDELLVEYIKKHGCGNWRTLPKNSGLLRCGKSCRLRWINYLRPDIKRGPFTSEEEGKIIQLHGMLGNRWAAIASHLPGRTDNEIKNYWNTHLKKRFIHSGHSLESQEPSFGPHQQSDMKYESSSVRHVIQWENARVEAEKRLSMELESSCLNHCSQTHTHSDCFLRLWHSEVGQSFRMITEKKAESESPTSQASSVFANMAQEQASSCNPKLDEGTAGSDSGSLEFLDASDSALKLLLDMPHDNVGFFEGLEQSENFQGPLHDRYD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1134 286 MobiDBLite consensus disorder prediction 220 236 - -
Lele47g1134 286 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele47g1134 286 Gene3D - 13 66 - -
Lele47g1134 286 Gene3D - 69 115 - -
Lele47g1134 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele47g1134 286 SMART sant 13 63 IPR001005 -
Lele47g1134 286 SMART sant 66 114 IPR001005 -
Lele47g1134 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele47g1134 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 214 - -
Lele47g1134 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele47g1134 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele47g1134 286 MobiDBLite consensus disorder prediction 220 240 - -
Lele47g1134 286 CDD SANT 16 61 IPR001005 -
Lele47g1134 286 FunFam Myb transcription factor 11 67 - -
Lele47g1134 286 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele47g1134 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele47g1134 286 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1134 Lele-ChrLele47 16905338 16907791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1134 1 269 MYB Transcription Factor Family AT3G61250 54.610 6.80e-96 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele47g1134 Myb_DNA-binding 7.5e-16 CL0123