Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1125 ATGCCCAACTCATCTTCATCGGATTCTGGGGATGGCAGCTTGGCTAAAATGTTCGATCGTGTCCTTGAGAAAGAATTTTCCGAGAATGACCAGCCTGAAGGATCTGACAAGAGTAGCTTCAACAGTACTGTAGCTGATCAACAGGCTGTACTGGAGACTGTAGCTAAAATTACTCATGATAAAGGCAAGAGAAATGATACTCAGGAGAGAAATGTTACCAGATCATTTCAATTTCAAGATGTGTTCTCCCTGGAGAATGAAGATTCTGATGATTCAACAACCTTGATTGACAGAAAGGACAATGTTTTTGTGATGTCAAACAAGAAATCCAAATACCCAGTACTTCAGTTGGATTTAAGGCTAATATCAGATTTGGTGGTTGTGATAGTTTCTGCAGCCATTGGAGGAATTCTCTTTTCCTGCTTGGGCCAACCGGTCATTGTGGGCTATCTCCTTGCTGGCTCCCTTATAGGACCTGGGGGATTGAATTTTATTAGTGAAATGGTACAGGTTGAAACTGTTGCACAGTTTGGGGTTGTTTTTCTTCTGTTTGCTCTGGGGCTGGAGTTCTCTTTGTCAAAGTTAAAAGCTGTGGGCCCTGTTGCTGTTTTGGGTGGACTGCTTCAAATTGTGACCTTTATGTTCTTGTGCGGCATTCTTACCATGTTTTTTGGAGCCAAGTTGTCAGAAGGTGTATTTGTTGCTTCCTTTCTGTCCATGTCATCAACTGCAGTGGTAGTGAAATTTTTGGTGGAGCGTAACATAAATAATTCTCTTCATGGTCAAGTGACAATTGGAACTCTTATTTTTCAGGATTGTGCTGTGGGTTTACTCTTTGCTTTGCTCCCAGTTTTGGGAGGCACCAGTGGCATCTTACAAGGAATAATTTCAATGGGAAAGTTGTTGCTAGTATTGTCCATGTATCTCACAGTGATATCTATATTGTGTTGGTCGTTTGTTCCCTTCTTTCTAAAACTGATGATGCAGCTGTCATCTCAGACAAATGAACTTTATCAGCTAGCTGCTGTGGCATTCTGCTTACTATCAGCATGGTGCAGTGACAAGCTTGGCCTTAGCCTCGAGCTGGGTTCATTTGTTGCTGGTGTTATGATTTCTACAACAGACTTTGCACAGCATACTTTGGACCAGGTGGAACCCATTCGTAACCTGTTTGCAGCTCTCTTCCTCTCAAGTATTGGAATGCTTATACATGTACATTTCCTATGGAACCATGTAGATATCTTGCTGGCATCTGTTATCCTTGTTATAGTTGTTAAGACTGCTGTTGCTGCTGTTGTTACTAAAACCTTTGGTTATAGTATTCGGACATCGTTTCTGGTTGGGATTTCACTTGCTCAGATTGGAGAGTTTGCTTTTGTTCTCCTCAGCCGTGCTTCAAATCTTCATCTTGTTGAGGGGAAAATGTATCTCCTCCTCCTAGGGACGACAGCTCTTAGTCTGGTTACAACCCCCCTATTGTTCAAATTGATACCTGCTGTCATGAATCTGGGTGTACTCATGCACTGGTTCCCCCCAGAGAGTAATGGACGAACCAGTTCACAGAATGAGGAGAAAGCTTCCATGATTGAAGTGAAAGGAACGTTGTGA 1608 0.4241 MPNSSSSDSGDGSLAKMFDRVLEKEFSENDQPEGSDKSSFNSTVADQQAVLETVAKITHDKGKRNDTQERNVTRSFQFQDVFSLENEDSDDSTTLIDRKDNVFVMSNKKSKYPVLQLDLRLISDLVVVIVSAAIGGILFSCLGQPVIVGYLLAGSLIGPGGLNFISEMVQVETVAQFGVVFLLFALGLEFSLSKLKAVGPVAVLGGLLQIVTFMFLCGILTMFFGAKLSEGVFVASFLSMSSTAVVVKFLVERNINNSLHGQVTIGTLIFQDCAVGLLFALLPVLGGTSGILQGIISMGKLLLVLSMYLTVISILCWSFVPFFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFAQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWNHVDILLASVILVIVVKTAVAAVVTKTFGYSIRTSFLVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPPESNGRTSSQNEEKASMIEVKGTL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1125 535 MobiDBLite consensus disorder prediction 17 32 - -
Lele47g1125 535 Pfam Sodium/hydrogen exchanger family 126 495 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele47g1125 535 Gene3D - 119 502 IPR038770 -
Lele47g1125 535 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 7 529 IPR045158 GO:0015386|GO:0071805|GO:1902600
Lele47g1125 535 MobiDBLite consensus disorder prediction 1 43 - -
Lele47g1125 535 MobiDBLite consensus disorder prediction 514 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1125 Lele-ChrLele47 16858052 16864872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1125 3 531 Antiporters AT5G51710 83.365 0.0 887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0262 45 2122400 2129246 Lele47g1125 47 16858052 16864872 hybridization
Lele46g0285 46 1855592 1862634 Lele47g1125 47 16858052 16864872 hybridization