Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1123 ATGGAAGATGGGATTGTGCTGTTCTGTTTGCAGAAGCAGAAAAGGGAGCGTCTTTTTGTAGTAATGGCGTTTTTCTTTCTCCTCTCTCCACTTGCCTCTTCCATCAGCCAAGAAGGACAAGCATTAATGGAGATTAAAGGTTCCTTCAGCAACATGGCAGATGTTGTGCTTGACTGGGATGACTTGCACAATGATGACTTCTGTTCATGGCGTGGAGTTTACTGTGATAATTTAACCCTTACTGTGCTTACTCTGAATCTGTCAAGTTTGAATCTGGGTGGGGAGATATCACCGGCCATTGGCGATTTGAGAAACTTGGAATCCATCGATCTGCAGGGAAATAAGCTGAATGGTCAGATTCCAGATGAAATTGGGAACTGCGCTGCACTTGTTCATCTGGATTTGTCTGATAATCAGCTAGATGGTGACATACCCTTCTCAATATCAAAGCTAAAGGAACTTGAGTTTTTGAATCTGAAGAATAATCAGTTGAGCGGTCCTATTCCTTCAACCTTAACCCAAATTCCAAACCTGAAGACTCTTGATCTTGCTCGTAATCAGCTCACTGGTGAGATACCAAGACTCCTCTATTGGAACGAAGTCTTGCAATACCTAGGGTTGAGAGGAAACATGTTGAGTGGAGCTCTATCCCCAGATATATGTCAATTAACTGGACTGTGGTATTTAGGCAACAACTTGACGGGCACAATACCTGAAACCATTGGGAACTGTACAAGTTTTCAAATTCTGGATATATCATATAACCAGATTACTGGTGAGATCCCCTATAATATTGGATTTCTGCAAGTGGCTACTCTGTCACTTCAAGGGAATAGACTAACTGGAAAAATTCCTGAAGTGATTGGTTTGATGCAAGCGCTTGCTATTTTGGACTTGAGTGAGAATGAACTGGTGGGGCCCATCCCTCCTGTACTTGGCAATTTATCTTTCACAGGCAAGCTGTATCTCCATGGAAACAAGCTCACTGGTTCAATACCTCCTGAACTTGGCAATATGTCTAAGCTGAGCTACCTGCAACTGAATGGCAATAAACTAGTTGGCAGAATTCCTGAGGAACTTGGAAAGCTTGAGCATTTGTTTGAATTGAATCTTGCTAACAATTATCTTGAAGGATCTATTCCACATAACATAAGCTCCTGCACTTCCTTGAATAAGTTCAATGTTCATGGTAATCGTTTAAGTGGTTCTATTCCTTTGAGCTTCCGCAGCCTTGGGAGTCTGACTTACTTAAATCTCTCAGAGAACAACTTCAAAGGGAATATACCTATTGAGTTGGGCCACATTATAAATCTTGATACACTGGATCTATCTCGCAATAATTTTTCGGGGCGGGTTCCAGAATCTGTTGGTTATCTTGAACATCTTCTGACACTTAACTTGAGCCATAACCATTTTACCGGTCCCTTGCCTGCTGAGTTTGGGAATCTGAAAAGCATCCAGATTATCGATATGTCTTTCAACAATCTATCTGGTAGCATTCCTCTTGAAATTGGGCTGTTGCAGAACCTTGTTTCACTGATTCTAAACAGCAATGACTTGCATGGGAAGATTCCTGAGCAGATAACAAACTGCTTCAGTCTCTCATCTTTGAATGTCTCTTACAATAACTTATCTGGAACAATTCCTCCTATGAAGAACTTCTCGCGATTTTCATCTGACAGCTTCATTGGAAATCCCTTGTTATGTGGAAATTTGTTAGGATCAATATGTGATCCTTACATGCCAAAATCCAGTGAAACTTTTTCCAGGGCTGCAATTGTTTGTCTCACTCTTGGGATCCTTACATTGTTGGCCATGGTATTAGTTGCTTTGTACAGATTGAGCCAATCGATGCGATTGATGAAGAGATCCAGAGGAACTGGGCAAGGCATGTGTTGCCCCAAACTTGTGGTTCTTCATATGGATATGGCCATGCACACCTATGATGATATAATGAGAAGTACAGAGAATCTAAGTGAGAAGTATATCATAGGATATGGCGCTTCGAGTACAGTGTACAAATGTGTTTTGAAGAATTCTCGACCGATTGCGATCAAGCGACTATACAATCAGCAGACAAACAACAAAAGGGAGTTTGAAACAGAACTTGAAACCATTGGCAGCATCAGGCATAGAAACCTTGTCACCTTGCATGGTTATGCACTAACTCCAAATGGGAACCTCCTCTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCACGGCCCCTCAAAGAAGGTGAAGCTTGACTGGGAAACGCGCTTAAGGATTGCTGTTGGAGCTGCTGAGGGACTTGCTTATCTCCACCATGGGTGCAACCCTAGAATTATCCACAGGGATATTAAGTCTTCAAATATTCTACTAGATGAGAACTTTGAGGCTCATCTCTCTGATTTTGGCATTGCCAAATGCATCTCAACCACAGTAACTCATGCATCAACACATGTTCTTGGAACAATAGGCTATATTGACCCTGAGTATGCCCGGACATCTCGCCTGAAAGAAAAATCCGATGTATACAGCTTTGGCATAGTTCTGCTCGAGCTTCTTACCGGGAAGAAAGCAGTGCACGATGAGTCAAACTTGCATCATTTGATACTGTCCAAGACGGATAACGACACTGTAATGGAGGCTGTGGATCCTGAAGTTTCTGTTACCTGCATAAATCAAGCCCATGTGAGGAAGACATTTCAGCTTGCACTGCTTTGCACAAAAAGAAATCCATCTGAGAGGCCTCCCATGCATGAGGTTGCCAAGGTTTTGGTGTCACTTCTCCCTGCACCTCCCAGTAAGAAATGTGCCTCACCTGCAAAGGCTATTGATTACGCGCGATTTGTGATCGAAAAGGGGCAGCAACAAGATCCGAAGAAGGAACTGCCACAACCTCAACAACAACGGAACAATTCTTATGATGCTCAATGGTTCATTCGCTTTGGCGATGCAGTATCCAAGAACACCCTCTAA 2973 0.4258 MEDGIVLFCLQKQKRERLFVVMAFFFLLSPLASSISQEGQALMEIKGSFSNMADVVLDWDDLHNDDFCSWRGVYCDNLTLTVLTLNLSSLNLGGEISPAIGDLRNLESIDLQGNKLNGQIPDEIGNCAALVHLDLSDNQLDGDIPFSISKLKELEFLNLKNNQLSGPIPSTLTQIPNLKTLDLARNQLTGEIPRLLYWNEVLQYLGLRGNMLSGALSPDICQLTGLWYLGNNLTGTIPETIGNCTSFQILDISYNQITGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPVLGNLSFTGKLYLHGNKLTGSIPPELGNMSKLSYLQLNGNKLVGRIPEELGKLEHLFELNLANNYLEGSIPHNISSCTSLNKFNVHGNRLSGSIPLSFRSLGSLTYLNLSENNFKGNIPIELGHIINLDTLDLSRNNFSGRVPESVGYLEHLLTLNLSHNHFTGPLPAEFGNLKSIQIIDMSFNNLSGSIPLEIGLLQNLVSLILNSNDLHGKIPEQITNCFSLSSLNVSYNNLSGTIPPMKNFSRFSSDSFIGNPLLCGNLLGSICDPYMPKSSETFSRAAIVCLTLGILTLLAMVLVALYRLSQSMRLMKRSRGTGQGMCCPKLVVLHMDMAMHTYDDIMRSTENLSEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQQTNNKREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPSKKVKLDWETRLRIAVGAAEGLAYLHHGCNPRIIHRDIKSSNILLDENFEAHLSDFGIAKCISTTVTHASTHVLGTIGYIDPEYARTSRLKEKSDVYSFGIVLLELLTGKKAVHDESNLHHLILSKTDNDTVMEAVDPEVSVTCINQAHVRKTFQLALLCTKRNPSERPPMHEVAKVLVSLLPAPPSKKCASPAKAIDYARFVIEKGQQQDPKKELPQPQQQRNNSYDAQWFIRFGDAVSKNTL 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1123 990 Gene3D Ribonuclease Inhibitor 199 286 IPR032675 -
Lele47g1123 990 Pfam Leucine Rich repeat 243 260 IPR001611 GO:0005515
Lele47g1123 990 Pfam Leucine Rich repeat 176 191 IPR001611 GO:0005515
Lele47g1123 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 200 306 - -
Lele47g1123 990 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Lele47g1123 990 Pfam Leucine rich repeat 437 496 IPR001611 GO:0005515
Lele47g1123 990 Pfam Protein kinase domain 661 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1123 990 Gene3D Ribonuclease Inhibitor 290 580 IPR032675 -
Lele47g1123 990 SUPERFAMILY Protein kinase-like (PK-like) 639 924 IPR011009 -
Lele47g1123 990 Gene3D Transferase(Phosphotransferase) domain 1 734 937 - -
Lele47g1123 990 SUPERFAMILY L domain-like 65 316 - -
Lele47g1123 990 SMART LRR_typ_2 175 199 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 363 387 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 103 127 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 411 435 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 151 174 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 459 482 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 507 531 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 291 315 IPR003591 -
Lele47g1123 990 SMART LRR_typ_2 339 362 IPR003591 -
Lele47g1123 990 SMART serkin_6 658 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1123 990 SUPERFAMILY RNI-like 230 551 - -
Lele47g1123 990 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Lele47g1123 990 ProSiteProfiles Leucine-rich repeat profile. 177 199 IPR001611 GO:0005515
Lele47g1123 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 175 924 - -
Lele47g1123 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 307 580 - -
Lele47g1123 990 ProSiteProfiles Protein kinase domain profile. 658 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1123 990 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Lele47g1123 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Lele47g1123 990 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 35 199 - -
Lele47g1123 990 Gene3D Ribonuclease Inhibitor 35 198 IPR032675 -
Lele47g1123 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 629 733 - -
Lele47g1123 990 Gene3D Phosphorylase Kinase; domain 1 628 733 - -
Lele47g1123 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 734 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1123 Lele-ChrLele47 16841126 16848293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1123 105 990 Receptor kinase-like Gene Family AT5G07180 74.128 0.0 1318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lele47g1123 Pkinase 2e-44 CL0016