LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele47g1107	ATGGGGTTTTCATTTTCACCACTTACATCCTTCATCTCTCTCCTGGTTATTGCTCTGTTGAACGCAAAATGGGTACGTGGGGATACAGAGCTTAGAGCACTTCTGGATATCAAAGCCGCTTTGGACCCAGAAAGCCAATATCTTTCCTCATGGACTATTAAGGGAAAACCATGTGATGGTTCTTCGTTCGAAGGAGTTGGTTGTAACGAGAAGGGTCAAGTGGCTAACATTTCATTGCAGGGAAAATGTCTCTCAGGGAAGCTTTCACCCGCCATTTCAGAGCTCAAGCAACTTACAGGACTTTACTTGCATTATAACTCCTTGCAGGGAACTATTCCCAGAGAAATTGCCAACTTGACGAACCTAAGTGACTTGTATTTGAATGTGAATAATCTCTCTGGCGAAATCCCTCCTGAGATAGGCAAAATGGAGAACCTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCAACACAGGTTGGTTCACTGAAGAAGCTTGTTGTTCTTGCTCTGCAGTCAAATCAATTAGCTGGTGCCATCCCTGCAAGTTTAGGTGCTTTGGGAATGCTAATAAGGCTCGATCTAAGCTCTAATCGCCTCTTCGGCTCCCTTCCCTCTACGTTAGCTGATGCTCCTTCTCTTCGAGTTCTAGATGTTCGCAACAACACTCTCTCTGGAAATGTACCTCCTGCTCTAAAGAGACTAGATGATGGATTTTTGTACGAGTACAATCTGGGATTATGTGGAGTTGGGTTTTCATCCTTGAAAACTTGCAATGATTCAGATCATAGTAATCCAGAGAGACCTAATAAGCCTTATGGAGCCGGTTTTGGCGGTGCATCGGCGAAAGATATACCGGAAACCGCGAATGTGCCACTTCCTTGCAATGGAACTCAGTGCCAAAACTCATCAAAACCCAAACAATCAGCATCTATTATTGTTGGCATAGTTGTGTTTGCAATTGCAGTACCAACAATTGGTGTTCTAACTTTCACACAATACCGTAGGCGAAAACAAAAGCTGGGGAACTCATTCGATAATGGTCTAATCACGACAAACCAAGCCAAGGGTACATACCAGAAAAATGGATCTCCTTTGGCCAGCCTTGAGTACTCTAACGGCTGGGACCCTTTAGCCGAAAGCCGGAATTTCATGGGGAATGATAACCATGATGATGTGTTCCATAGTTTCAGGTTCAACTTGGAAGAGGTTGAGACTGCTACTCAGTATTTCTCGGAGTCGAACTTGTTGGGTAAGAGTATCTTCAGCGCTACGTATAAGGGAATGTTAAGAGACGGATCTGCTGTTGCCATTAAAAGAATCAGTAAAACAAGCTGCAAGAGTGATGACTCTGAGTTTTTGAAGGGACTTCACATTTTGACATCACTGAGGAATGAGAATTTAGTGAGGTTGAGAGGATTTTGTTGCTCGAGAGGCCGAGGCGAGTGCTTTCTGGTTTATGATTTTGTTCATAATGGAAATCTTTCATGCTACCTCGATGTCAACGAAGGAGAAGTACAAGTTCTCGAATGGTCAACTAGAGTTTCCATGGTTAAAGGCATTGCTAAAGAATCCTCCAGACTTGAGGAACTCATTGACTCGAATCTCCATGGCAGATTCATTAAATACGAGGCTGCAAAGCTAGTGAAAATGGCCGTGCTTTGCTCCCATGAATCTCCTTTTGAGAGGCCATTGATGGAAGCCATTGTTACAGAACTTGAAAGTTTCAATATTTGTCTCTGA	1755	0.433	MGFSFSPLTSFISLLVIALLNAKWVRGDTELRALLDIKAALDPESQYLSSWTIKGKPCDGSSFEGVGCNEKGQVANISLQGKCLSGKLSPAISELKQLTGLYLHYNSLQGTIPREIANLTNLSDLYLNVNNLSGEIPPEIGKMENLQVLQLCYNQLTGSIPTQVGSLKKLVVLALQSNQLAGAIPASLGALGMLIRLDLSSNRLFGSLPSTLADAPSLRVLDVRNNTLSGNVPPALKRLDDGFLYEYNLGLCGVGFSSLKTCNDSDHSNPERPNKPYGAGFGGASAKDIPETANVPLPCNGTQCQNSSKPKQSASIIVGIVVFAIAVPTIGVLTFTQYRRRKQKLGNSFDNGLITTNQAKGTYQKNGSPLASLEYSNGWDPLAESRNFMGNDNHDDVFHSFRFNLEEVETATQYFSESNLLGKSIFSATYKGMLRDGSAVAIKRISKTSCKSDDSEFLKGLHILTSLRNENLVRLRGFCCSRGRGECFLVYDFVHNGNLSCYLDVNEGEVQVLEWSTRVSMVKGIAKESSRLEELIDSNLHGRFIKYEAAKLVKMAVLCSHESPFERPLMEAIVTELESFNICL	584

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele47g1107	584	MobiDBLite	consensus disorder prediction	263	283	-	-
	Lele47g1107	584	Gene3D	Ribonuclease Inhibitor	29	143	IPR032675	-
	Lele47g1107	584	FunFam	Leucine-rich repeat receptor-like kinase	29	139	-	-
	Lele47g1107	584	FunFam	Protein NSP-INTERACTING KINASE 2	141	263	-	-
	Lele47g1107	584	Pfam	Protein tyrosine and serine/threonine kinase	419	530	IPR001245	GO:0004672\|GO:0006468
	Lele47g1107	584	Gene3D	Ribonuclease Inhibitor	144	263	IPR032675	-
	Lele47g1107	584	SUPERFAMILY	Protein kinase-like (PK-like)	398	527	IPR011009	-
	Lele47g1107	584	FunFam	Protein NSP-INTERACTING KINASE 2	385	493	-	-
	Lele47g1107	584	Pfam	Leucine rich repeat N-terminal domain	29	69	IPR013210	-
	Lele47g1107	584	Gene3D	Phosphorylase Kinase; domain 1	385	493	-	-
	Lele47g1107	584	SUPERFAMILY	L domain-like	30	237	-	-
	Lele47g1107	584	SMART	tyrkin_6	415	577	IPR020635	GO:0004713\|GO:0006468
	Lele47g1107	584	ProSiteProfiles	Protein kinase domain profile.	415	584	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele47g1107	584	Gene3D	Transferase(Phosphotransferase) domain 1	505	582	-	-
	Lele47g1107	584	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	145	542	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele47g1107	Lele-ChrLele47	16706575	16709369	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele47g1107	10	527	Miscellaneous Gene Families	AT4G22730	53.992	0.0	545

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-IV	Lele47g1107		PK_Tyr_Ser-Thr	1.5e-11	CL0016