Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1065 ATGGAGATAGAGGCTAGCAGGGTGGTCGGGAATAATGGGACGACGGCGATGCCGGCGCTAAGTCCTCTCAGCGAGACGCTGTGGAGGGAGACTAAGGCCAACGTCGACTTCGTCGATGTGTCGGCTAGGCTCACCTGGAAGGATCTCACCGTCATGGTCACTCTCGGCAACGGAGAGACCCAGAACGTTCTCGAAGGTCTCACCGGCTACGCCGAGCCCGGCACCTTCACCGCTCTCATGGGTCCGTCCGGCTCCGGCAAATCCACTCTCCTAGACGCCCTCTCTAGCCGTCTCGCTGCTAATGCTTTCCTCTCCGGATCCATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTTGGCACCGCTGCATATGTGACGCAAGACGACAACCTCATAGGAACATTGACGGTACGAGAAACCATATCGTACTCGGCTCGTCTGAGGCTACCGGATAAGATGCCATGGTCGGACAAGCGAGCTCTGGTGGAGAGCACAATAATAGCCATGGGGCTTCAGGATTGTGCCGACACAGTGATCGGAAACTGGCATCTCCGGGGAATCAGTGGCGGAGAGAAGAGAAGAGTTAGCATCGCTTTGGAGATCTTGATGAGGCCCAGGTTGCTCTTTCTTGATGAACCTACAAGTGGACTCGACAGTGCTTCGGCTTTCTTTGTGACTCAAACACTACGAGCTCTTGCAAGGGATGGTAGAACAGTGATAGCTTCAATTCACCAACCAAGCAGTGAAGTGTTTGAACTATTTGACCAATTGTACCTTCTTTCTGGCGGCAAAACTGTTTACTTTGGCCAAGCTTCTGAAGCTTACGAGTTCTTTGCACAAGCTGGCTTTCCATGCCCTGCATTGAGGAACCCTTCTGATCATTTCCTTAGATGCATCAACTCTGACTTTGACAAAGTCAAGGCCACACTCAAAGGCTCCATGAAACTCAGGTTTGAAGCAAGTGATGATCCTTTGGACAAGATAACTACAGCTGAAGCTATACGGACTCTGATAGGTTATTATCGGACTTCTCAGTACTCTTATGCTGCAACACAGAAAGTGGATGAGATATCGAAAGTGAAAGGAACAGTGCTGGATTCAGGAGGAAGTCAGGCGAGCTTCTTCATGCAGGCATTTACATTAACGAAGAGATCATTCATCAACATGTCAAGGGATTTTGGATATTACTGGCTTCGTCTTGTCATCTACATTGTTGTCACTGTCTGCATCGGAACCATCTATCTCAATGTTGGAACTGGCTACAACTCCATTCTGGCAAGAGGTTCATGTGCATCGTTTGTGTTTGGGTTTGTGACATTCATGTCAATTGGAGGGTTCCCTTCATTTGTGGAAGACATGAAGGTATTCCAAAGGGAGAGGCTGAATGGTCACTATGGAGTGGTATCGTTTGTGATAAGCAACACATTATCTGCAATGCCGTTTCTGATACTCATAACGTTTCTGTCGGGAACCATTTGTTACTTCATGGTTCGTCTCCACCCTGGCTTCTGGCACTACATCTTCTTCGTCTTGTGCCTCTATGCCAGTGTCACGGTCGTTGAGAGCTTGATGATGGCCATTGCTAGTATTGTCCCCAACTTCCTCATGGGTATCATCATCGGCGCTGGCATTCAGGGCATATTCATGTTGGTGTCTGGCTACTTTAGGCTCCCACATGACATACCAAAGCCATTCTGGCGCTACCCAATGTCTTATATCAGTTTCCACTTCTGGGCATTACAGGGTCAATACCAAAATGATCTGAAAGGGTTGATCTTTGACAACCAGACGCCGGATCTTCCCCAGATTCCAGGGGAGTACATACTGGAGAACGTGTTCCAGATTGATGTAAACAGATCAAAGTGGATTGATTTGATAGTGATATTCAGCATGATCATCATATACAGAATCATCTTCTTCGTAATGATCAAGATCAACGAGGATGTGACTCCATGGGTGAGAGGTTACATTGCCAGGAGATCAATGCAGCAGAAGAGTGCAACACAGAACACCACCATTGCTCCTGATGTTCTCACTCAATCTCCTTCTCTACGAACCTATATCACAAGCCAATCCAGTTCCGGTGCTCAGAAAAGGTAA 2100 0.481 MEIEASRVVGNNGTTAMPALSPLSETLWRETKANVDFVDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGSILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMPWSDKRALVESTIIAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEASDDPLDKITTAEAIRTLIGYYRTSQYSYAATQKVDEISKVKGTVLDSGGSQASFFMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTVCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVVSFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYIFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPDLPQIPGEYILENVFQIDVNRSKWIDLIVIFSMIIIYRIIFFVMIKINEDVTPWVRGYIARRSMQQKSATQNTTIAPDVLTQSPSLRTYITSQSSSGAQKR 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1065 699 Pfam ABC transporter 66 215 IPR003439 GO:0005524
Lele47g1065 699 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 44 287 IPR003439 GO:0005524
Lele47g1065 699 CDD ABCG_EPDR 41 269 - -
Lele47g1065 699 FunFam ABC transporter G family member 11 38 281 - -
Lele47g1065 699 SMART AAA_5 73 244 IPR003593 -
Lele47g1065 699 Pfam ABC-2 type transporter 377 583 IPR013525 GO:0016020|GO:0140359
Lele47g1065 699 Pfam ABC-2 type transporter 244 300 IPR043926 GO:0140359
Lele47g1065 699 ProSitePatterns ABC transporters family signature. 187 201 IPR017871 GO:0005524|GO:0016887
Lele47g1065 699 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 666 - -
Lele47g1065 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 281 IPR027417 -
Lele47g1065 699 Gene3D - 34 282 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1065 Lele-ChrLele47 16389406 16394425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1065 74 248 Calmodulin-binding Proteins AT2G36910 33.333 1.71e-11 65.9