Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1049 ATGTTTTTTGTTGCTTCAGTCTTCAGAGTTCGTTGTGCTCGTGCCTCATCCGGTTTCAAGATGGATGAATATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGATGGTGAGTTCTACTATCGAAAGCGCAAAGAGAAACGCACTCAAACCAGAGAAGATGTTCTTTATGGGGTGTTTGCGGACTCTGATGATGATGAAGATGATTATTCGACCAGAAAACGTAGAAAAGATCGTGACTTATCTAAGAAGCCTGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGAACTTTTATGCCTAATCAAGATGATAACCGTTCCAAAGAACAGATTGAAGAAGAAAATTATACTAGTGAGGACAGGCCAGGTTTAGGTCTTGGCATGGGAACTACTAGCACTTCTATTTCTGGGTTAGGATTTAATACTAGTCCTCGTGAAAGTGCTTCTGATGAAGATAATGGTGATGAAGATTTTCTTCCTACAGCATTTGGAAAGAAGATTAAGGAGGGAGCAATAAGAAGGGAGAGGGAAAGGGAGAGAGCAAAATTGGAAAAGAAGAGAGCACAAGGAAAAACTCAAGCTCAAGATGGATTTTCAGATGTTGGGAAGTTTGAGAAGTATACAAAGGGGATCGGAATGAAGTTGTTGGAGAAGATGGGTTATAGAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTAGCTCCTGTTGAGGCTCATTTGAGGGCCAAGAATACAGGCATTGGATTTAATGACTCGAAGGGAACAACTCCTTTGCCAAGTGTGCAAGTTGAGAAGACAGCATTGCCTGGAGTTGCTCAACCTACCGCTGTTAGAGCAAAGGAAAGGTTGTGGTCAAAGCAATCAAGGTCAAAGAAGAAGAAAGATGAGGATGATTATATTACTGCTGAGGAATTGTTAGCAAGCAATCAAGAACAGGGTCTGGAGGTTGTTCAGAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACGAATTTATCTGATTTGAATGCTGAGGAGAAAGCTAAGGAAAATGATATTCCAATGCCAGAGCTTCAGCATAACTTGGGGTTAATTGTTAGGTTGGCTGAAGCAGATATCCAAGAGATTGATAGAAAATTGAGGGGAGAGAGGGAGATAGCACTTAGCTTGAAAAAGGAAAAAGAGAAGTTAGAAACTGAGTTAGCTCACCAAGAAAAGCAGTTGCAAGATTTGGAGGAAATAGATAGTGTGCTGGCCCTAGTCGGAAAAGAGAATTCAATGGGGACATTGACATTGGATTTGCTTGCACAGTGCTTTGCTGACCTGCGGGAAAGATACGCTGATAGCTACAAGTTGTGTAACTTGTCATGTATTGCTAGCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCACTTGAAAATCCATCGCATGGGTTAGAGTTGGTGTCACGGTGGAAAACGTTGCTTCAAGAAGATTGCCTTCATATCTGGGATGTAACTTCGCCTTATACTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATAAATACCTGGCAGGCACGGGATCCTGAGCCCATGTTACGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCGTCAGTTCTCACAACCATGTTGGATAATATAGTCATGCCAAAATTGGCCACCGCTGTAGATACATGGGAACCACATCGTGAGACTATTCCGATTCATACTTGGGTGCACCCATGGTTACCTTTGTTAGGACACAAGTTAGAGGGGACATATCAGATTATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGCGATGGTTCTGCTTATGCTATATTGTCACCTTGGAAGACCGTATTTGATTCCGTGAGTTGGGAACAGCTTATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTCCTGCAAGAGTTCCAAGTAAACCCAGCAGATCAGAAGCTTGATCAGTTTTATTGGGTGATGAATTGGGCTCCTGCTGTCCCAATTCATCTGATGGTTGATATAATGGAAAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAACCCTAACTTTGAAGAAGTTACAAAATGGTACTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCTAATGAAAGCATTCGATATCAGTTAAACCGCGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTGGTCCAACCTGGCTTGAAAGAAAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCAGCAGCTCATGCTCAAACCCAAGCTCCTTCAGGCTTCGGGGGTGCTCCCCATATGGATGGTGCTGCTGGTGTCCATGAGATGAGCTTAAAGGAAGTCATTGAGGCCCATGCCCAACAACATGGTTTGCTATTCAAGCTTAAACCTGGCAGAATGCACAATGGTCATCAAATATATGGATTTGGTAATGTCAGCATTATAATAGATTCTCTAAATCAAAAGGTATATGCCCAAACTGAGGATGCGTGGTCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAATCCCTTGGTCGGAGACGATGA 2655 0.4249 MFFVASVFRVRCARASSGFKMDEYQEMERFGMDNDFEGGEWIDGEFYYRKRKEKRTQTREDVLYGVFADSDDDEDDYSTRKRRKDRDLSKKPDLTKPVNFVSTGTFMPNQDDNRSKEQIEEENYTSEDRPGLGLGMGTTSTSISGLGFNTSPRESASDEDNGDEDFLPTAFGKKIKEGAIRRERERERAKLEKKRAQGKTQAQDGFSDVGKFEKYTKGIGMKLLEKMGYRGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDSKGTTPLPSVQVEKTALPGVAQPTAVRAKERLWSKQSRSKKKKDEDDYITAEELLASNQEQGLEVVQKVFDMRGPQVRVITNLSDLNAEEKAKENDIPMPELQHNLGLIVRLAEADIQEIDRKLRGEREIALSLKKEKEKLETELAHQEKQLQDLEEIDSVLALVGKENSMGTLTLDLLAQCFADLRERYADSYKLCNLSCIASSYALPLFIRVFQGWDPLENPSHGLELVSRWKTLLQEDCLHIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTTMLDNIVMPKLATAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGTYQIIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDQFYWVMNWAPAVPIHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQTQAPSGFGGAPHMDGAAGVHEMSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQKVYAQTEDAWSLESLQGLLELHNKSLGRRR 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1049 884 MobiDBLite consensus disorder prediction 96 112 - -
Lele47g1049 884 Pfam G-patch domain 216 257 IPR000467 GO:0003676
Lele47g1049 884 Pfam Tuftelin interacting protein N terminal 26 124 IPR022159 -
Lele47g1049 884 MobiDBLite consensus disorder prediction 113 127 - -
Lele47g1049 884 PIRSF TFIP11 21 879 IPR024933 -
Lele47g1049 884 Pfam GC-rich sequence DNA-binding factor-like protein 437 702 IPR022783 -
Lele47g1049 884 MobiDBLite consensus disorder prediction 135 155 - -
Lele47g1049 884 SMART G-patch_5 214 259 IPR000467 GO:0003676
Lele47g1049 884 Coils Coil 384 418 - -
Lele47g1049 884 MobiDBLite consensus disorder prediction 166 199 - -
Lele47g1049 884 MobiDBLite consensus disorder prediction 72 205 - -
Lele47g1049 884 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 21 871 IPR045211 GO:0000390
Lele47g1049 884 MobiDBLite consensus disorder prediction 74 93 - -
Lele47g1049 884 Coils Coil 179 201 - -
Lele47g1049 884 ProSiteProfiles G-patch domain profile. 216 261 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1049 Lele-ChrLele47 16275839 16281445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1049 216 257 C2H2 Transcription Factor Family AT5G26610 45.238 6.91e-07 50.1