Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1039 ATGCTTGTGAACACGTGGCATCTCTTGTTGAATATGTTTATTTGGGGTTATGTCAAAGATGAGAATGTGAGTAGAGGAAGGAAGAAAAGAAGAGACGCCAATCCTATGGATTCAATGCATCTTTGTCTTTTCACATTTGCGTCGAGAAATTCGCCTTCTCTTTCACCCACCCTTTATTCAATGGAGCCTTCACATATCAAAGATAAAATCGTTCTTTTGAGTAAGGCGAATTTCGTGCTAGGGCACAGAACGCTTCTTTTGTATCTCGCCGCTTCGTCACTCGCTCTCTCCGCTCTACGGTTTATAAATTCTGATTGTTCGAAAATGGCCGATGCTCATGATACCGATAAGAACATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCCTTGGAGGCTGCTCGAGGAAATGGGACAAGCATGATTTCTCTTATCATGCCTCCACGTGATCAGATATCTCGTGTCACCAAGATGCTTGGTGATGAGTTTGGAACTGCGTCAAACATAAAAAGCAGAGTGAATAGGCAGTCTGTGCTTGGTGCTATCACTTCTGCTCAGCAGAGGCTTAAGCTTTATAACAGGGTTCCTCCAAATGGGCTTGTTCTGTATACTGGGACAATTGTCACAGAAGATGGAAAGGAGAAGAAGGTGACTATCGATTTTGAGCCATTTAGACCTATCAATGCATCTCTCTATCTTTGTGACAACAAGTTTCATACAGAAGCTCTCAATGAGCTTCTGGAATCTGATGACAAGTTTGGTTTCATAGTCATGGATGGTAATGGCACACTTTTTGGTACCTTAAGTGGCAATACAAGAGAGGTGCTTCATAAATTTAGTGTGGATCTGCCAAAGAAGCATGGTAGAGGAGGTCAGTCAGCCCTACGATTTGCCCGTCTTCGGATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCCGAGCTTGCTACACAGTTTTATATTAATCCTGCTACCAGTCAGCCCAATGTTTCAGGATTAATTCTTGCTGGTTCAGCAGACTTCAAAACTGAGCTTAGCCAGTCAGATATGTTTGACCCTCGACTTCAGGCAAAAATACTTAATGTTGTTGATGTGTCTTACGGAGGGGAGAACGGCTTCAATCAGGCTATTGAACTGTCATCAGAAATTCTGGCCAATGTGAAGTTTATCCAGGAGAAGCGCTTGATTGGAAAATACTTTGAGGAGATTAGTCAGGATACTGGCAAGTATGTTTTTGGGGTTGATGATACTCTTAAAGCGCTGGAGATGGGTGCAGTTGAGATACTTATTGTCTGGGAAAGTCTGGATATAAATAGATATGTCCTGAAACACAGCACTAGCGGTGAAGTTGTTATAAAACATTTCAACAAGGAACAAGAAGCCAACCAGGACAATTTTCGGGATTCTGGAAATGCTGAATATGAGGTTCAGGAAAAGATGTCTCTCTTGGAGTGGTTTGCCAATGAGTACAGACGGTTTGGCTGCTCTCTTGAGTTTGTCACTAATAAATCACAAGAGGGCTCACAGTTTTGCAGGGGTTTTGGTGGTATAGGGGGGATTCTGCGCTACCAGCTTGATATGAGGACATTTGATGACTTTTCTGATGATGAAAATCTGTATGATGATTCTGAATAG 1635 0.4239 MLVNTWHLLLNMFIWGYVKDENVSRGRKKRRDANPMDSMHLCLFTFASRNSPSLSPTLYSMEPSHIKDKIVLLSKANFVLGHRTLLLYLAASSLALSALRFINSDCSKMADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVEILIVWESLDINRYVLKHSTSGEVVIKHFNKEQEANQDNFRDSGNAEYEVQEKMSLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDENLYDDSE 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1039 544 SUPERFAMILY L30e-like 386 527 IPR029064 -
Lele47g1039 544 Pfam eRF1 domain 2 252 385 IPR005141 -
Lele47g1039 544 Gene3D eRF1 domain 2 244 385 IPR042226 -
Lele47g1039 544 SUPERFAMILY Translational machinery components 250 384 - -
Lele47g1039 544 FunFam Peptide chain release factor subunit 1 387 544 - -
Lele47g1039 544 Gene3D eRF1 domain 1 105 243 IPR024049 -
Lele47g1039 544 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 111 536 IPR004403 GO:0003747|GO:0006415
Lele47g1039 544 Gene3D - 387 544 IPR029064 -
Lele47g1039 544 Pfam eRF1 domain 1 126 246 IPR005140 -
Lele47g1039 544 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 114 248 IPR024049 -
Lele47g1039 544 SMART eRF1_1_2 112 248 IPR005140 -
Lele47g1039 544 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 121 524 IPR004403 GO:0003747|GO:0006415
Lele47g1039 544 FunFam Eukaryotic peptide chain release factor subunit 1 110 243 - -
Lele47g1039 544 FunFam Eukaryotic peptide chain release factor subunit 1 244 385 - -
Lele47g1039 544 Pfam eRF1 domain 3 389 525 IPR005142 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1039 Lele-ChrLele47 16208095 16211594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1039 109 544 Eukaryotic Initiation Factors Gene Family AT5G47880 89.498 0.0 805