Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g1013 ATGTTTGTCATGATAATTCCTTTAAAGATATTGTTGAAACTTGAAATAGTGAGATTCTCCGCTCCATTGGAAAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGCTATCATGTTACCGAGTATCTGGGATCTGCTGCGTTCAGCAAAGCCATACAGGCTCATGACTTGCATACAGGCATGGATGTTTGTGTCAAAATAATAAAGAACAACAAGGAATTCTTTGATCAAAGCCTTGACGAGATTAAGCTTCTCAACCATAAAGCATCAACACTGGTGTTTAAGTTCAAAATAGATTCAGTCATATTATGGGGGCTAGAACATTTGCTAATTGTATGTGAACTACTTAAAGCCAACTTATATGAGTTTCATAAATTTAATAGAGAGTCAGGGGGTGAAGTATACTTCACAATGCCAAGATTGCAGTCAATTGCAATTCAGTGTTTGGAAGCACTGCAGTTTTTGCACAGCCTTGGACTTATACATTGTGACCTGAAGCCAGAGAATATTTTGGTGAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGGAGCAGTTGTTATGAGACTGATCACCTTTGCTCATATGTCCAGTCCAGGTCCTATCGCGCTCCTGAAGTTATATTGGGACTTCCGTATGACAAGAAGATTGATATCTGGTCACTTGGCTGCATTTTGGCAGAACTTTGTACTGGCATCGTCCTCTTTCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGCATCATCGGTCCAATTGATCAAAGTATGTTTACAAAAGGGAGGGATACATTTAAGTACTTCACCAAAAATCATATGCTTTACGAACGGAATCAGGAAACCAACAGGTTAGAATACCTGATTCCCAAGAAGACATCTTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTTATTTGCTTGAGGTTAACCCAAAGAAGCGGCCTTCTGCTATCGAGGCCCTTAAGCATCCATGGTTATCATACCCTTACGAACCCATATCATCTTGA 1065 0.4009 MFVMIIPLKILLKLEIVRFSAPLERTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKEFFDQSLDEIKLLNHKASTLVFKFKIDSVILWGLEHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSIAIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCYETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGIVLFQNDSPATLLARVIGIIGPIDQSMFTKGRDTFKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAYLLEVNPKKRPSAIEALKHPWLSYPYEPISS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g1013 354 CDD PKc_DYRK_like 46 345 - -
Lele47g1013 354 Pfam Protein kinase domain 46 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1013 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Lele47g1013 354 SUPERFAMILY Protein kinase-like (PK-like) 34 347 IPR011009 -
Lele47g1013 354 SMART serkin_6 46 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1013 354 PANTHER DUAL SPECIFICITY PROTEIN KINASE 25 345 - -
Lele47g1013 354 Gene3D Phosphorylase Kinase; domain 1 20 122 - -
Lele47g1013 354 ProSiteProfiles Protein kinase domain profile. 46 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele47g1013 354 FunFam Serine/threonine-protein kinase ppk15 122 346 - -
Lele47g1013 354 Gene3D Transferase(Phosphotransferase) domain 1 123 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g1013 Lele-ChrLele47 16044265 16046943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g1013 52 346 MAP Kinase Gene Family AT4G01370 29.967 4.21e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lele47g1013 Pkinase 6.9e-47 CL0016