Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0995 ATGAATTCGAACTATGGCAAACCCAATCAAACGAGTTCATCATCTGCCTCACTGAAGAACTTCAATTTCGACTTTGATCTTGGGGTCGGATCCAATCGACCCAAATCTCTGAACGATCAGAAAAACCAGAAATCGTCCCATCCATATTCTTCTTCCTCTTCTTCTTCTTCATATTCATCCGCCCAACCCAGAGCCTCGTGGCAAACCAACAAGCCATCATGGACTCACCAGCCTGCACCGAATTTGGCGAATCAATCTGGATTGCCGGGTGGACCCACTTCCATGGTGGGCGATATCTTTGGCAAGAGTTGGGGATCTACACAACCTTCGGGTTCTAGTTCGACCGTCGGAGTTGTTAATAAAAACCCTAATCTCTTTGGAGATTTGGTGAGCTCTGCAATGGGACAGAATTCTAAGAGTAGCAGTAATACTCCTATAAATTCGATTCCTGTTTCTAAGGCGTCAAGTACTGCATCGAACAAGAGCTCCTTTTCGATGGGAAATATGGCGGATGCTTTGCCCAAAACCAGTAACACGACAACAAGTAGTGGAAGTTGGGGATCTTCTGGGTACAATAATACTAGTACGAGCGCTAATAAGAGCCCAAATCTTGGTGGTCCTTCAATGCGAAGTATGAATAGTGGTAGTTCACCTGGGAGTGGAAAATTCAGCTCTTTGGCTGGATTTGGTTCAAAACCATCTGGTAGTCTTAATTCAGCTGGAATGGCCACAAGAAATAATAAAGCAGAGGATGATGGTTTTGGAGATTTCCAGAATGCTCCCAAACCAAGATCTACCACATTCCCATCATCAAGTAGTTCTACTGCAGATAATATCAGTTTTACAGGAGGATCTACCAATTTGAATCATCCAAAGCAGACATCTGCTGGTGATGACCCTATAGACATGTTTTTCTCATCTTCCTCAGCTTCGGCTGGAAGTGCTACTGTGACTTCAGAAGGATTTGGAGGAAAATCCTCTTCTGACATTAATGACTGGGGTTTGGATTCTGAATTTGGTGGAAGAGGACATGATGGGGGCGGTACAACCACTGAGCTTGAAGGGCTTCCACCTCCTCCTGCTGGACTATCGGGTTCTTCAGCAAAAGGTAAAGGGATGGACAATTACAAGCAAGGTCAATTTGCAGATGCTATTAAGTGGCTATCTTGGGCTGCCATCCTTCTTGAGAAAACAGAGGATAATGCTGGTATGACAGAGGTGTTGTCATGCAGAGCCTCATGTTACAAAGAAGTTGGAGAGTACAAAAAAGCGGTGGCCGATTGTACAAAGGTGCTAGAAAACGATGACACAAATGTATCCATATTGGTGCAACGTGCTCTCTTGTATGAGAGCATGGAAAAGTACAAGCTTGGTGCGGAGGACATGAGGACTGTTCTAAAGATTGATCCTGTTAATAGGGTTGCAAGAAGTACCATTCATCGGCTGACAAAACTGGCTGACTAG 1464 0.4454 MNSNYGKPNQTSSSSASLKNFNFDFDLGVGSNRPKSLNDQKNQKSSHPYSSSSSSSSYSSAQPRASWQTNKPSWTHQPAPNLANQSGLPGGPTSMVGDIFGKSWGSTQPSGSSSTVGVVNKNPNLFGDLVSSAMGQNSKSSSNTPINSIPVSKASSTASNKSSFSMGNMADALPKTSNTTTSSGSWGSSGYNNTSTSANKSPNLGGPSMRSMNSGSSPGSGKFSSLAGFGSKPSGSLNSAGMATRNNKAEDDGFGDFQNAPKPRSTTFPSSSSSTADNISFTGGSTNLNHPKQTSAGDDPIDMFFSSSSASAGSATVTSEGFGGKSSSDINDWGLDSEFGGRGHDGGGTTTELEGLPPPPAGLSGSSAKGKGMDNYKQGQFADAIKWLSWAAILLEKTEDNAGMTEVLSCRASCYKEVGEYKKAVADCTKVLENDDTNVSILVQRALLYESMEKYKLGAEDMRTVLKIDPVNRVARSTIHRLTKLAD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0995 487 MobiDBLite consensus disorder prediction 100 245 - -
Lele47g0995 487 SUPERFAMILY TPR-like 369 478 IPR011990 GO:0005515
Lele47g0995 487 MobiDBLite consensus disorder prediction 315 359 - -
Lele47g0995 487 MobiDBLite consensus disorder prediction 260 303 - -
Lele47g0995 487 SMART tpr_5 365 398 IPR019734 GO:0005515
Lele47g0995 487 SMART tpr_5 439 472 IPR019734 GO:0005515
Lele47g0995 487 SMART tpr_5 405 438 IPR019734 GO:0005515
Lele47g0995 487 MobiDBLite consensus disorder prediction 315 333 - -
Lele47g0995 487 PANTHER OS03G0340700 PROTEIN 1 487 - -
Lele47g0995 487 Gene3D Tetratricopeptide repeat domain 365 486 IPR011990 GO:0005515
Lele47g0995 487 MobiDBLite consensus disorder prediction 33 91 - -
Lele47g0995 487 MobiDBLite consensus disorder prediction 23 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0995 Lele-ChrLele47 15911126 15913305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0995 380 482 Calmodulin-binding Proteins AT3G25230 32.075 9.02e-09 55.8