Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele47g0994 ATGTGTGGAGGTGCCATCATCTCCGACTTCGTCCCTCAGAAACCTGGTCGGAGATCGACCACCAACGACCTCTGGTCCAACCTCCAAACCTTCGTCGACCTCCTAGGATTCGATCCCACCACTGCTGCTCTTTCTTCCAAACACCACAAGCCATCAGCTGCTTCCCCTAACAATGATCAGAAACTCTCTCCCATTCCAACCAACCCAGCAGTGTCACGTGAGAATAATAACAAAAATGACAATAACAACAAGTCATCCGAGAAGAAGAAAAGCGGTGCAGGGAGGACTCGCAAGAACATTTACAGAGGAATCCGGCAAAGGCCGTGGGGCAAGTGGGCCGCCGAGATAAGGGACCCATACAAGGGCGTCAGAGTCTGGCTCGGCACCTTCAAAACCGCCGAAGAAGCCGCCAGAGCCTATGACCAAGCCGCCAAGAGCATCCGTGGCGACAAAGCCAAGCTCAACTTCCCACCAGCTCCTCCTCCAGCTTCGGCTCCCCTGGAACCTCCCCAGAAGAAGCAGTGCCTCGTCCCCAGCAACCAAAACGAAGCCGTTCAGCTCATCCAACAAATGTCAGCCATCGAATATTTCCTCAGACTGGACGACGACAGCAACAACAACAACAAGAACAACACTACTGATGTTTCTCAGCCAATCGGAGGAAGCGTTGGCTTACTCTCTGAGTGGGACCCGATGGACGATATCTGGATGCTCAACGACATCGTTATGCATCACCTTCATCAGAAAGGTCCCTACTAG 759 0.5283 MCGGAIISDFVPQKPGRRSTTNDLWSNLQTFVDLLGFDPTTAALSSKHHKPSAASPNNDQKLSPIPTNPAVSRENNNKNDNNNKSSEKKKSGAGRTRKNIYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFKTAEEAARAYDQAAKSIRGDKAKLNFPPAPPPASAPLEPPQKKQCLVPSNQNEAVQLIQQMSAIEYFLRLDDDSNNNNKNNTTDVSQPIGGSVGLLSEWDPMDDIWMLNDIVMHHLHQKGPY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele47g0994 252 MobiDBLite consensus disorder prediction 45 79 - -
Lele47g0994 252 CDD AP2 100 156 IPR001471 GO:0003700|GO:0006355
Lele47g0994 252 FunFam Ethylene-responsive transcription factor 2 99 158 - -
Lele47g0994 252 PANTHER DNA-BINDING DOMAIN 59 192 IPR044808 GO:0003700|GO:0009873
Lele47g0994 252 SMART rav1_2 100 163 IPR001471 GO:0003700|GO:0006355
Lele47g0994 252 MobiDBLite consensus disorder prediction 80 94 - -
Lele47g0994 252 MobiDBLite consensus disorder prediction 43 102 - -
Lele47g0994 252 ProSiteProfiles AP2/ERF domain profile. 100 157 IPR001471 GO:0003700|GO:0006355
Lele47g0994 252 Gene3D AP2/ERF domain 100 158 IPR036955 GO:0003700|GO:0006355
Lele47g0994 252 PRINTS Ethylene responsive element binding protein signature 101 112 IPR001471 GO:0003700|GO:0006355
Lele47g0994 252 PRINTS Ethylene responsive element binding protein signature 123 139 IPR001471 GO:0003700|GO:0006355
Lele47g0994 252 Pfam AP2 domain 101 149 IPR001471 GO:0003700|GO:0006355
Lele47g0994 252 SUPERFAMILY DNA-binding domain 100 157 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele47g0994 Lele-ChrLele47 15906028 15907481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele47g0994 1 245 AP2-EREBP Transcription Factor Family AT3G16770 39.100 3.00e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele47g0994 AP2 2.7e-14 CL0081